Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
Smco4Q9JIS3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smco4Q9JIS3 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smco4Q9JIS3 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smco4Q9JIS3 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smco4Q9JIS3 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.29■□□□□ 0.36
Smco4Q9JIS3 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Smco4Q9JIS3 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Smco4Q9JIS3 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.29■□□□□ 0.36
Smco4Q9JIS3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Smco4Q9JIS3 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Smco4Q9JIS3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smco4Q9JIS3 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Smco4Q9JIS3 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.28■□□□□ 0.36
Smco4Q9JIS3 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smco4Q9JIS3 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smco4Q9JIS3 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smco4Q9JIS3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smco4Q9JIS3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Smco4Q9JIS3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smco4Q9JIS3 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.27■□□□□ 0.36
Smco4Q9JIS3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smco4Q9JIS3 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smco4Q9JIS3 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smco4Q9JIS3 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smco4Q9JIS3 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smco4Q9JIS3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smco4Q9JIS3 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Smco4Q9JIS3 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smco4Q9JIS3 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smco4Q9JIS3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smco4Q9JIS3 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smco4Q9JIS3 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC17.25■□□□□ 0.35
Smco4Q9JIS3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smco4Q9JIS3 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Smco4Q9JIS3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smco4Q9JIS3 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smco4Q9JIS3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.24■□□□□ 0.35
Smco4Q9JIS3 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smco4Q9JIS3 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smco4Q9JIS3 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smco4Q9JIS3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smco4Q9JIS3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smco4Q9JIS3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smco4Q9JIS3 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smco4Q9JIS3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Smco4Q9JIS3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smco4Q9JIS3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smco4Q9JIS3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smco4Q9JIS3 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Smco4Q9JIS3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smco4Q9JIS3 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smco4Q9JIS3 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smco4Q9JIS3 Golph3-202ENSMUST00000226517 2359 ntBASIC17.22■□□□□ 0.35
Smco4Q9JIS3 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Smco4Q9JIS3 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smco4Q9JIS3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smco4Q9JIS3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smco4Q9JIS3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smco4Q9JIS3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smco4Q9JIS3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smco4Q9JIS3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.22■□□□□ 0.35
Smco4Q9JIS3 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smco4Q9JIS3 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Smco4Q9JIS3 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smco4Q9JIS3 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Smco4Q9JIS3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.21■□□□□ 0.34
Smco4Q9JIS3 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smco4Q9JIS3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Smco4Q9JIS3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Smco4Q9JIS3 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smco4Q9JIS3 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Smco4Q9JIS3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.19■□□□□ 0.34
Smco4Q9JIS3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smco4Q9JIS3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Smco4Q9JIS3 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smco4Q9JIS3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smco4Q9JIS3 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Smco4Q9JIS3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smco4Q9JIS3 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smco4Q9JIS3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Smco4Q9JIS3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC17.19■□□□□ 0.34
Smco4Q9JIS3 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smco4Q9JIS3 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Smco4Q9JIS3 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Smco4Q9JIS3 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
Smco4Q9JIS3 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Smco4Q9JIS3 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smco4Q9JIS3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smco4Q9JIS3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smco4Q9JIS3 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.18■□□□□ 0.34
Smco4Q9JIS3 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Smco4Q9JIS3 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Smco4Q9JIS3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.18■□□□□ 0.34
Smco4Q9JIS3 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smco4Q9JIS3 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smco4Q9JIS3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smco4Q9JIS3 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Smco4Q9JIS3 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.17■□□□□ 0.34
Smco4Q9JIS3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms