Protein–RNA interactions for Protein: Q9EQ80

Nif3l1, NIF3-like protein 1, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nif3l1Q9EQ80 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.32■■□□□ 1
Nif3l1Q9EQ80 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Nif3l1Q9EQ80 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC21.32■■□□□ 1
Nif3l1Q9EQ80 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nif3l1Q9EQ80 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nif3l1Q9EQ80 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nif3l1Q9EQ80 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nif3l1Q9EQ80 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nif3l1Q9EQ80 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Nif3l1Q9EQ80 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.31■■□□□ 1
Nif3l1Q9EQ80 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Nif3l1Q9EQ80 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Nif3l1Q9EQ80 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC21.3■■□□□ 1
Nif3l1Q9EQ80 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.3■■□□□ 1
Nif3l1Q9EQ80 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.3■■□□□ 1
Nif3l1Q9EQ80 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nif3l1Q9EQ80 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nif3l1Q9EQ80 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nif3l1Q9EQ80 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nif3l1Q9EQ80 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.29■■□□□ 1
Nif3l1Q9EQ80 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
Nif3l1Q9EQ80 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.29■■□□□ 1
Nif3l1Q9EQ80 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nif3l1Q9EQ80 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.29■■□□□ 1
Nif3l1Q9EQ80 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC21.29■■□□□ 1
Nif3l1Q9EQ80 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.29■■□□□ 1
Nif3l1Q9EQ80 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Nif3l1Q9EQ80 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Nif3l1Q9EQ80 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.29■■□□□ 1
Nif3l1Q9EQ80 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
Nif3l1Q9EQ80 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nif3l1Q9EQ80 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
Nif3l1Q9EQ80 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Nif3l1Q9EQ80 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.28■■□□□ 1
Nif3l1Q9EQ80 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC21.28■■□□□ 1
Nif3l1Q9EQ80 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nif3l1Q9EQ80 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nif3l1Q9EQ80 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nif3l1Q9EQ80 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.27■■□□□ 1
Nif3l1Q9EQ80 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.27■■□□□ 1
Nif3l1Q9EQ80 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.27■■□□□ 1
Nif3l1Q9EQ80 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Nif3l1Q9EQ80 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.26■□□□□ 0.99
Nif3l1Q9EQ80 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.26■□□□□ 0.99
Nif3l1Q9EQ80 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC21.26■□□□□ 0.99
Nif3l1Q9EQ80 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Nif3l1Q9EQ80 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
Nif3l1Q9EQ80 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
Nif3l1Q9EQ80 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.26■□□□□ 0.99
Nif3l1Q9EQ80 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
Nif3l1Q9EQ80 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nif3l1Q9EQ80 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nif3l1Q9EQ80 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Nif3l1Q9EQ80 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nif3l1Q9EQ80 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC21.24■□□□□ 0.99
Nif3l1Q9EQ80 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC21.24■□□□□ 0.99
Nif3l1Q9EQ80 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.24■□□□□ 0.99
Nif3l1Q9EQ80 Nsd1-203ENSMUST00000224156 1149 ntBASIC21.24■□□□□ 0.99
Nif3l1Q9EQ80 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Nif3l1Q9EQ80 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
Nif3l1Q9EQ80 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Nif3l1Q9EQ80 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Nif3l1Q9EQ80 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.24■□□□□ 0.99
Nif3l1Q9EQ80 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nif3l1Q9EQ80 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Nif3l1Q9EQ80 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Nif3l1Q9EQ80 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nif3l1Q9EQ80 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Nif3l1Q9EQ80 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Nif3l1Q9EQ80 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nif3l1Q9EQ80 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Nif3l1Q9EQ80 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Nif3l1Q9EQ80 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nif3l1Q9EQ80 Gm5921-201ENSMUST00000075898 882 ntBASIC21.22■□□□□ 0.99
Nif3l1Q9EQ80 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Nif3l1Q9EQ80 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Nif3l1Q9EQ80 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Nif3l1Q9EQ80 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nif3l1Q9EQ80 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nif3l1Q9EQ80 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Nif3l1Q9EQ80 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nif3l1Q9EQ80 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Nif3l1Q9EQ80 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nif3l1Q9EQ80 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.21■□□□□ 0.99
Nif3l1Q9EQ80 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nif3l1Q9EQ80 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Nif3l1Q9EQ80 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Nif3l1Q9EQ80 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
Nif3l1Q9EQ80 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Nif3l1Q9EQ80 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Nif3l1Q9EQ80 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nif3l1Q9EQ80 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nif3l1Q9EQ80 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nif3l1Q9EQ80 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nif3l1Q9EQ80 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC21.2■□□□□ 0.98
Nif3l1Q9EQ80 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC21.2■□□□□ 0.98
Nif3l1Q9EQ80 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Nif3l1Q9EQ80 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nif3l1Q9EQ80 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Nif3l1Q9EQ80 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms