Protein–RNA interactions for Protein: Q9EQ46

Vmn1r40, Vomeronasal type-1 receptor 40, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r40Q9EQ46 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vmn1r40Q9EQ46 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vmn1r40Q9EQ46 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Vmn1r40Q9EQ46 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vmn1r40Q9EQ46 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vmn1r40Q9EQ46 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Vmn1r40Q9EQ46 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.38■□□□□ 0.85
Vmn1r40Q9EQ46 Gm7417-201ENSMUST00000192950 473 ntBASIC20.38■□□□□ 0.85
Vmn1r40Q9EQ46 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vmn1r40Q9EQ46 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Vmn1r40Q9EQ46 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vmn1r40Q9EQ46 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vmn1r40Q9EQ46 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
Vmn1r40Q9EQ46 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vmn1r40Q9EQ46 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.37■□□□□ 0.85
Vmn1r40Q9EQ46 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.37■□□□□ 0.85
Vmn1r40Q9EQ46 Gm10399-202ENSMUST00000202768 748 ntBASIC20.37■□□□□ 0.85
Vmn1r40Q9EQ46 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vmn1r40Q9EQ46 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vmn1r40Q9EQ46 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Vmn1r40Q9EQ46 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.36■□□□□ 0.85
Vmn1r40Q9EQ46 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.36■□□□□ 0.85
Vmn1r40Q9EQ46 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.36■□□□□ 0.85
Vmn1r40Q9EQ46 Gm40881-201ENSMUST00000223397 166 ntBASIC20.36■□□□□ 0.85
Vmn1r40Q9EQ46 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.36■□□□□ 0.85
Vmn1r40Q9EQ46 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vmn1r40Q9EQ46 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vmn1r40Q9EQ46 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vmn1r40Q9EQ46 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Vmn1r40Q9EQ46 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.35■□□□□ 0.85
Vmn1r40Q9EQ46 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vmn1r40Q9EQ46 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vmn1r40Q9EQ46 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vmn1r40Q9EQ46 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vmn1r40Q9EQ46 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Vmn1r40Q9EQ46 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Vmn1r40Q9EQ46 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.34■□□□□ 0.85
Vmn1r40Q9EQ46 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vmn1r40Q9EQ46 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vmn1r40Q9EQ46 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Vmn1r40Q9EQ46 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vmn1r40Q9EQ46 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vmn1r40Q9EQ46 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.33■□□□□ 0.85
Vmn1r40Q9EQ46 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vmn1r40Q9EQ46 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vmn1r40Q9EQ46 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.33■□□□□ 0.84
Vmn1r40Q9EQ46 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vmn1r40Q9EQ46 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Vmn1r40Q9EQ46 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Vmn1r40Q9EQ46 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Vmn1r40Q9EQ46 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Vmn1r40Q9EQ46 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Vmn1r40Q9EQ46 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vmn1r40Q9EQ46 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vmn1r40Q9EQ46 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Vmn1r40Q9EQ46 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vmn1r40Q9EQ46 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vmn1r40Q9EQ46 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Vmn1r40Q9EQ46 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.3■□□□□ 0.84
Vmn1r40Q9EQ46 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vmn1r40Q9EQ46 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vmn1r40Q9EQ46 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Vmn1r40Q9EQ46 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vmn1r40Q9EQ46 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vmn1r40Q9EQ46 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vmn1r40Q9EQ46 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vmn1r40Q9EQ46 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vmn1r40Q9EQ46 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.28■□□□□ 0.84
Vmn1r40Q9EQ46 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.28■□□□□ 0.84
Vmn1r40Q9EQ46 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vmn1r40Q9EQ46 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vmn1r40Q9EQ46 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vmn1r40Q9EQ46 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vmn1r40Q9EQ46 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vmn1r40Q9EQ46 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vmn1r40Q9EQ46 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vmn1r40Q9EQ46 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.27■□□□□ 0.84
Vmn1r40Q9EQ46 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.27■□□□□ 0.84
Vmn1r40Q9EQ46 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.27■□□□□ 0.84
Vmn1r40Q9EQ46 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vmn1r40Q9EQ46 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vmn1r40Q9EQ46 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Vmn1r40Q9EQ46 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.26■□□□□ 0.83
Vmn1r40Q9EQ46 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Vmn1r40Q9EQ46 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vmn1r40Q9EQ46 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vmn1r40Q9EQ46 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vmn1r40Q9EQ46 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Vmn1r40Q9EQ46 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vmn1r40Q9EQ46 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vmn1r40Q9EQ46 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vmn1r40Q9EQ46 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.25■□□□□ 0.83
Vmn1r40Q9EQ46 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Vmn1r40Q9EQ46 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.25■□□□□ 0.83
Vmn1r40Q9EQ46 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vmn1r40Q9EQ46 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vmn1r40Q9EQ46 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
Vmn1r40Q9EQ46 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Vmn1r40Q9EQ46 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vmn1r40Q9EQ46 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms