Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.13■□□□□ 0.97
Rrp8Q9DB85 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Rrp8Q9DB85 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.13■□□□□ 0.97
Rrp8Q9DB85 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rrp8Q9DB85 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rrp8Q9DB85 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rrp8Q9DB85 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rrp8Q9DB85 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Rrp8Q9DB85 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.12■□□□□ 0.97
Rrp8Q9DB85 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Rrp8Q9DB85 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.12■□□□□ 0.97
Rrp8Q9DB85 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rrp8Q9DB85 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.12■□□□□ 0.97
Rrp8Q9DB85 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rrp8Q9DB85 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC21.11■□□□□ 0.97
Rrp8Q9DB85 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rrp8Q9DB85 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.11■□□□□ 0.97
Rrp8Q9DB85 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rrp8Q9DB85 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rrp8Q9DB85 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Rrp8Q9DB85 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rrp8Q9DB85 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Rrp8Q9DB85 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rrp8Q9DB85 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rrp8Q9DB85 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
Rrp8Q9DB85 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Rrp8Q9DB85 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.1■□□□□ 0.97
Rrp8Q9DB85 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
Rrp8Q9DB85 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rrp8Q9DB85 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Rrp8Q9DB85 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rrp8Q9DB85 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Rrp8Q9DB85 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rrp8Q9DB85 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rrp8Q9DB85 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.08■□□□□ 0.97
Rrp8Q9DB85 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.08■□□□□ 0.97
Rrp8Q9DB85 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.08■□□□□ 0.97
Rrp8Q9DB85 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Rrp8Q9DB85 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rrp8Q9DB85 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rrp8Q9DB85 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Rrp8Q9DB85 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rrp8Q9DB85 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rrp8Q9DB85 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rrp8Q9DB85 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.06■□□□□ 0.96
Rrp8Q9DB85 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rrp8Q9DB85 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rrp8Q9DB85 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rrp8Q9DB85 Gm12821-201ENSMUST00000120022 600 ntBASIC21.06■□□□□ 0.96
Rrp8Q9DB85 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rrp8Q9DB85 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rrp8Q9DB85 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rrp8Q9DB85 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
Rrp8Q9DB85 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rrp8Q9DB85 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.04■□□□□ 0.96
Rrp8Q9DB85 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rrp8Q9DB85 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Rrp8Q9DB85 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Rrp8Q9DB85 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.03■□□□□ 0.96
Rrp8Q9DB85 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.03■□□□□ 0.96
Rrp8Q9DB85 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rrp8Q9DB85 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.03■□□□□ 0.96
Rrp8Q9DB85 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rrp8Q9DB85 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rrp8Q9DB85 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rrp8Q9DB85 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rrp8Q9DB85 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rrp8Q9DB85 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.02■□□□□ 0.96
Rrp8Q9DB85 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.02■□□□□ 0.96
Rrp8Q9DB85 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rrp8Q9DB85 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Rrp8Q9DB85 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rrp8Q9DB85 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rrp8Q9DB85 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
Rrp8Q9DB85 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rrp8Q9DB85 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
Rrp8Q9DB85 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21■□□□□ 0.95
Rrp8Q9DB85 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21■□□□□ 0.95
Rrp8Q9DB85 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rrp8Q9DB85 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21■□□□□ 0.95
Rrp8Q9DB85 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rrp8Q9DB85 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rrp8Q9DB85 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rrp8Q9DB85 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21■□□□□ 0.95
Rrp8Q9DB85 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rrp8Q9DB85 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21■□□□□ 0.95
Rrp8Q9DB85 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Rrp8Q9DB85 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.99■□□□□ 0.95
Rrp8Q9DB85 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rrp8Q9DB85 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rrp8Q9DB85 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rrp8Q9DB85 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rrp8Q9DB85 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rrp8Q9DB85 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.99■□□□□ 0.95
Rrp8Q9DB85 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rrp8Q9DB85 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rrp8Q9DB85 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rrp8Q9DB85 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rrp8Q9DB85 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Rrp8Q9DB85 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms