Protein–RNA interactions for Protein: Q9D3I0

5530400C23Rik, RIKEN cDNA 5530400C23 gene, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
5530400C23RikQ9D3I0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
5530400C23RikQ9D3I0 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
5530400C23RikQ9D3I0 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
5530400C23RikQ9D3I0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
5530400C23RikQ9D3I0 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.04■□□□□ 0.96
5530400C23RikQ9D3I0 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
5530400C23RikQ9D3I0 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
5530400C23RikQ9D3I0 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
5530400C23RikQ9D3I0 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
5530400C23RikQ9D3I0 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
5530400C23RikQ9D3I0 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
5530400C23RikQ9D3I0 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
5530400C23RikQ9D3I0 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
5530400C23RikQ9D3I0 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
5530400C23RikQ9D3I0 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
5530400C23RikQ9D3I0 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.02■□□□□ 0.96
5530400C23RikQ9D3I0 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
5530400C23RikQ9D3I0 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.02■□□□□ 0.96
5530400C23RikQ9D3I0 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.02■□□□□ 0.96
5530400C23RikQ9D3I0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.02■□□□□ 0.95
5530400C23RikQ9D3I0 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
5530400C23RikQ9D3I0 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
5530400C23RikQ9D3I0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
5530400C23RikQ9D3I0 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
5530400C23RikQ9D3I0 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
5530400C23RikQ9D3I0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
5530400C23RikQ9D3I0 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC21■□□□□ 0.95
5530400C23RikQ9D3I0 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
5530400C23RikQ9D3I0 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC21■□□□□ 0.95
5530400C23RikQ9D3I0 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
5530400C23RikQ9D3I0 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
5530400C23RikQ9D3I0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
5530400C23RikQ9D3I0 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
5530400C23RikQ9D3I0 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.99■□□□□ 0.95
5530400C23RikQ9D3I0 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
5530400C23RikQ9D3I0 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.99■□□□□ 0.95
5530400C23RikQ9D3I0 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
5530400C23RikQ9D3I0 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
5530400C23RikQ9D3I0 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
5530400C23RikQ9D3I0 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.98■□□□□ 0.95
5530400C23RikQ9D3I0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
5530400C23RikQ9D3I0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
5530400C23RikQ9D3I0 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
5530400C23RikQ9D3I0 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
5530400C23RikQ9D3I0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
5530400C23RikQ9D3I0 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
5530400C23RikQ9D3I0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
5530400C23RikQ9D3I0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
5530400C23RikQ9D3I0 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.97■□□□□ 0.95
5530400C23RikQ9D3I0 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
5530400C23RikQ9D3I0 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.97■□□□□ 0.95
5530400C23RikQ9D3I0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
5530400C23RikQ9D3I0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
5530400C23RikQ9D3I0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
5530400C23RikQ9D3I0 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
5530400C23RikQ9D3I0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
5530400C23RikQ9D3I0 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
5530400C23RikQ9D3I0 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
5530400C23RikQ9D3I0 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
5530400C23RikQ9D3I0 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
5530400C23RikQ9D3I0 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
5530400C23RikQ9D3I0 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
5530400C23RikQ9D3I0 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
5530400C23RikQ9D3I0 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
5530400C23RikQ9D3I0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
5530400C23RikQ9D3I0 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.94■□□□□ 0.94
5530400C23RikQ9D3I0 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.94■□□□□ 0.94
5530400C23RikQ9D3I0 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.94■□□□□ 0.94
5530400C23RikQ9D3I0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
5530400C23RikQ9D3I0 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
5530400C23RikQ9D3I0 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
5530400C23RikQ9D3I0 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
5530400C23RikQ9D3I0 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
5530400C23RikQ9D3I0 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
5530400C23RikQ9D3I0 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
5530400C23RikQ9D3I0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
5530400C23RikQ9D3I0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
5530400C23RikQ9D3I0 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
5530400C23RikQ9D3I0 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
5530400C23RikQ9D3I0 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.93■□□□□ 0.94
5530400C23RikQ9D3I0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
5530400C23RikQ9D3I0 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
5530400C23RikQ9D3I0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
5530400C23RikQ9D3I0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
5530400C23RikQ9D3I0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.92■□□□□ 0.94
5530400C23RikQ9D3I0 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
5530400C23RikQ9D3I0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
5530400C23RikQ9D3I0 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
5530400C23RikQ9D3I0 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
5530400C23RikQ9D3I0 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
5530400C23RikQ9D3I0 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
5530400C23RikQ9D3I0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
5530400C23RikQ9D3I0 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.91■□□□□ 0.94
5530400C23RikQ9D3I0 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.91■□□□□ 0.94
5530400C23RikQ9D3I0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
5530400C23RikQ9D3I0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
5530400C23RikQ9D3I0 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.9■□□□□ 0.94
5530400C23RikQ9D3I0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
5530400C23RikQ9D3I0 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.9■□□□□ 0.94
5530400C23RikQ9D3I0 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms