Protein–RNA interactions for Protein: Q9D1D6

Cthrc1, Collagen triple helix repeat-containing protein 1, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cthrc1Q9D1D6 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cthrc1Q9D1D6 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cthrc1Q9D1D6 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
Cthrc1Q9D1D6 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.02■□□□□ 0.8
Cthrc1Q9D1D6 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Cthrc1Q9D1D6 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Cthrc1Q9D1D6 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cthrc1Q9D1D6 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cthrc1Q9D1D6 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.02■□□□□ 0.8
Cthrc1Q9D1D6 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cthrc1Q9D1D6 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.02■□□□□ 0.79
Cthrc1Q9D1D6 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Cthrc1Q9D1D6 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cthrc1Q9D1D6 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.01■□□□□ 0.79
Cthrc1Q9D1D6 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.01■□□□□ 0.79
Cthrc1Q9D1D6 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cthrc1Q9D1D6 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cthrc1Q9D1D6 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cthrc1Q9D1D6 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Cthrc1Q9D1D6 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cthrc1Q9D1D6 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.01■□□□□ 0.79
Cthrc1Q9D1D6 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cthrc1Q9D1D6 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20■□□□□ 0.79
Cthrc1Q9D1D6 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20■□□□□ 0.79
Cthrc1Q9D1D6 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Cthrc1Q9D1D6 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Cthrc1Q9D1D6 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cthrc1Q9D1D6 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cthrc1Q9D1D6 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Cthrc1Q9D1D6 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.99■□□□□ 0.79
Cthrc1Q9D1D6 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cthrc1Q9D1D6 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.99■□□□□ 0.79
Cthrc1Q9D1D6 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cthrc1Q9D1D6 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cthrc1Q9D1D6 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Cthrc1Q9D1D6 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Cthrc1Q9D1D6 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cthrc1Q9D1D6 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cthrc1Q9D1D6 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
Cthrc1Q9D1D6 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cthrc1Q9D1D6 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cthrc1Q9D1D6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cthrc1Q9D1D6 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Cthrc1Q9D1D6 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cthrc1Q9D1D6 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.96■□□□□ 0.79
Cthrc1Q9D1D6 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cthrc1Q9D1D6 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cthrc1Q9D1D6 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cthrc1Q9D1D6 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cthrc1Q9D1D6 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.96■□□□□ 0.79
Cthrc1Q9D1D6 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cthrc1Q9D1D6 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
Cthrc1Q9D1D6 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
Cthrc1Q9D1D6 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cthrc1Q9D1D6 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Cthrc1Q9D1D6 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Cthrc1Q9D1D6 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Cthrc1Q9D1D6 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Cthrc1Q9D1D6 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Cthrc1Q9D1D6 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
Cthrc1Q9D1D6 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.95■□□□□ 0.78
Cthrc1Q9D1D6 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.95■□□□□ 0.78
Cthrc1Q9D1D6 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.95■□□□□ 0.78
Cthrc1Q9D1D6 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cthrc1Q9D1D6 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cthrc1Q9D1D6 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cthrc1Q9D1D6 Gm13238-201ENSMUST00000117655 780 ntBASIC19.94■□□□□ 0.78
Cthrc1Q9D1D6 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Cthrc1Q9D1D6 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.94■□□□□ 0.78
Cthrc1Q9D1D6 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Cthrc1Q9D1D6 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.94■□□□□ 0.78
Cthrc1Q9D1D6 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cthrc1Q9D1D6 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.93■□□□□ 0.78
Cthrc1Q9D1D6 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cthrc1Q9D1D6 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Cthrc1Q9D1D6 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.92■□□□□ 0.78
Cthrc1Q9D1D6 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
Cthrc1Q9D1D6 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cthrc1Q9D1D6 Gm15546-201ENSMUST00000122095 826 ntBASIC19.92■□□□□ 0.78
Cthrc1Q9D1D6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.92■□□□□ 0.78
Cthrc1Q9D1D6 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.92■□□□□ 0.78
Cthrc1Q9D1D6 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.91■□□□□ 0.78
Cthrc1Q9D1D6 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cthrc1Q9D1D6 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cthrc1Q9D1D6 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cthrc1Q9D1D6 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cthrc1Q9D1D6 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cthrc1Q9D1D6 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cthrc1Q9D1D6 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.9■□□□□ 0.78
Cthrc1Q9D1D6 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cthrc1Q9D1D6 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cthrc1Q9D1D6 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Cthrc1Q9D1D6 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Cthrc1Q9D1D6 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cthrc1Q9D1D6 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Cthrc1Q9D1D6 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cthrc1Q9D1D6 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cthrc1Q9D1D6 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Cthrc1Q9D1D6 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cthrc1Q9D1D6 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms