Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Khdc3Q9CWU5 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Khdc3Q9CWU5 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Khdc3Q9CWU5 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Khdc3Q9CWU5 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Khdc3Q9CWU5 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Khdc3Q9CWU5 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Khdc3Q9CWU5 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Khdc3Q9CWU5 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Khdc3Q9CWU5 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.52■□□□□ 0.88
Khdc3Q9CWU5 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Khdc3Q9CWU5 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Khdc3Q9CWU5 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.52■□□□□ 0.88
Khdc3Q9CWU5 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Khdc3Q9CWU5 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Khdc3Q9CWU5 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Khdc3Q9CWU5 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Khdc3Q9CWU5 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Khdc3Q9CWU5 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Khdc3Q9CWU5 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Khdc3Q9CWU5 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Khdc3Q9CWU5 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Khdc3Q9CWU5 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.5■□□□□ 0.87
Khdc3Q9CWU5 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Khdc3Q9CWU5 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Khdc3Q9CWU5 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Khdc3Q9CWU5 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Khdc3Q9CWU5 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Khdc3Q9CWU5 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Khdc3Q9CWU5 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Khdc3Q9CWU5 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Khdc3Q9CWU5 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Khdc3Q9CWU5 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.49■□□□□ 0.87
Khdc3Q9CWU5 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Khdc3Q9CWU5 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Khdc3Q9CWU5 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.48■□□□□ 0.87
Khdc3Q9CWU5 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Khdc3Q9CWU5 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Khdc3Q9CWU5 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.48■□□□□ 0.87
Khdc3Q9CWU5 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Khdc3Q9CWU5 Cap2-205ENSMUST00000225824 1634 ntBASIC20.48■□□□□ 0.87
Khdc3Q9CWU5 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Khdc3Q9CWU5 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Khdc3Q9CWU5 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Khdc3Q9CWU5 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Khdc3Q9CWU5 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.47■□□□□ 0.87
Khdc3Q9CWU5 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Khdc3Q9CWU5 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Khdc3Q9CWU5 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Khdc3Q9CWU5 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Khdc3Q9CWU5 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Khdc3Q9CWU5 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Khdc3Q9CWU5 Gm10420-201ENSMUST00000121713 882 ntBASIC20.46■□□□□ 0.87
Khdc3Q9CWU5 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Khdc3Q9CWU5 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Khdc3Q9CWU5 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Khdc3Q9CWU5 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Khdc3Q9CWU5 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Khdc3Q9CWU5 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.45■□□□□ 0.86
Khdc3Q9CWU5 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Khdc3Q9CWU5 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
Khdc3Q9CWU5 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.45■□□□□ 0.86
Khdc3Q9CWU5 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Khdc3Q9CWU5 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Khdc3Q9CWU5 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Khdc3Q9CWU5 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Khdc3Q9CWU5 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Khdc3Q9CWU5 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Khdc3Q9CWU5 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Khdc3Q9CWU5 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Khdc3Q9CWU5 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Khdc3Q9CWU5 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Khdc3Q9CWU5 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Khdc3Q9CWU5 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Khdc3Q9CWU5 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.43■□□□□ 0.86
Khdc3Q9CWU5 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Khdc3Q9CWU5 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Khdc3Q9CWU5 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Khdc3Q9CWU5 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Khdc3Q9CWU5 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.42■□□□□ 0.86
Khdc3Q9CWU5 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Khdc3Q9CWU5 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Khdc3Q9CWU5 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Khdc3Q9CWU5 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Khdc3Q9CWU5 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Khdc3Q9CWU5 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Khdc3Q9CWU5 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Khdc3Q9CWU5 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Khdc3Q9CWU5 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Khdc3Q9CWU5 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Khdc3Q9CWU5 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Khdc3Q9CWU5 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Khdc3Q9CWU5 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Khdc3Q9CWU5 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Khdc3Q9CWU5 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Khdc3Q9CWU5 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.4■□□□□ 0.86
Khdc3Q9CWU5 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.39■□□□□ 0.86
Khdc3Q9CWU5 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Khdc3Q9CWU5 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Khdc3Q9CWU5 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms