Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp1aQ921W0 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
Chmp1aQ921W0 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp1aQ921W0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Chmp1aQ921W0 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Chmp1aQ921W0 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp1aQ921W0 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp1aQ921W0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp1aQ921W0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.82■□□□□ 0.6
Chmp1aQ921W0 Gm9812-201ENSMUST00000061934 968 ntBASIC18.82■□□□□ 0.6
Chmp1aQ921W0 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Chmp1aQ921W0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Chmp1aQ921W0 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp1aQ921W0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Chmp1aQ921W0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Chmp1aQ921W0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp1aQ921W0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp1aQ921W0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Chmp1aQ921W0 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp1aQ921W0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp1aQ921W0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Chmp1aQ921W0 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp1aQ921W0 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp1aQ921W0 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp1aQ921W0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.79■□□□□ 0.6
Chmp1aQ921W0 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.79■□□□□ 0.6
Chmp1aQ921W0 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp1aQ921W0 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp1aQ921W0 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp1aQ921W0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
Chmp1aQ921W0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Chmp1aQ921W0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
Chmp1aQ921W0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp1aQ921W0 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Chmp1aQ921W0 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp1aQ921W0 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC18.78■□□□□ 0.6
Chmp1aQ921W0 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.78■□□□□ 0.6
Chmp1aQ921W0 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp1aQ921W0 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp1aQ921W0 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp1aQ921W0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Chmp1aQ921W0 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Chmp1aQ921W0 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.77■□□□□ 0.6
Chmp1aQ921W0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Chmp1aQ921W0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp1aQ921W0 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp1aQ921W0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp1aQ921W0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp1aQ921W0 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp1aQ921W0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp1aQ921W0 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp1aQ921W0 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Chmp1aQ921W0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Chmp1aQ921W0 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.77■□□□□ 0.59
Chmp1aQ921W0 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.76■□□□□ 0.59
Chmp1aQ921W0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp1aQ921W0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp1aQ921W0 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Chmp1aQ921W0 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp1aQ921W0 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp1aQ921W0 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Chmp1aQ921W0 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.75■□□□□ 0.59
Chmp1aQ921W0 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Chmp1aQ921W0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Chmp1aQ921W0 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC18.75■□□□□ 0.59
Chmp1aQ921W0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
Chmp1aQ921W0 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp1aQ921W0 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Chmp1aQ921W0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.75■□□□□ 0.59
Chmp1aQ921W0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.75■□□□□ 0.59
Chmp1aQ921W0 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.75■□□□□ 0.59
Chmp1aQ921W0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.75■□□□□ 0.59
Chmp1aQ921W0 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp1aQ921W0 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Chmp1aQ921W0 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp1aQ921W0 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Chmp1aQ921W0 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp1aQ921W0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp1aQ921W0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Chmp1aQ921W0 Terc-201ENSMUST00000082862 423 ntBASIC18.74■□□□□ 0.59
Chmp1aQ921W0 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp1aQ921W0 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp1aQ921W0 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp1aQ921W0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp1aQ921W0 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Chmp1aQ921W0 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Chmp1aQ921W0 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp1aQ921W0 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp1aQ921W0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp1aQ921W0 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp1aQ921W0 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.73■□□□□ 0.59
Chmp1aQ921W0 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Chmp1aQ921W0 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Chmp1aQ921W0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Chmp1aQ921W0 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Chmp1aQ921W0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp1aQ921W0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp1aQ921W0 Mir3960-201ENSMUST00000198213 73 ntBASIC18.72■□□□□ 0.59
Chmp1aQ921W0 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Chmp1aQ921W0 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms