Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
Pcdhb8Q91XZ2 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb8Q91XZ2 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb8Q91XZ2 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb8Q91XZ2 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb8Q91XZ2 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb8Q91XZ2 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb8Q91XZ2 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Pcdhb8Q91XZ2 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Pcdhb8Q91XZ2 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Pcdhb8Q91XZ2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Pcdhb8Q91XZ2 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb8Q91XZ2 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb8Q91XZ2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb8Q91XZ2 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb8Q91XZ2 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb8Q91XZ2 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb8Q91XZ2 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Pcdhb8Q91XZ2 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Pcdhb8Q91XZ2 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb8Q91XZ2 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb8Q91XZ2 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb8Q91XZ2 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb8Q91XZ2 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb8Q91XZ2 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdhb8Q91XZ2 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdhb8Q91XZ2 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb8Q91XZ2 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.89■□□□□ 0.93
Pcdhb8Q91XZ2 Gm12366-201ENSMUST00000121722 873 ntBASIC20.89■□□□□ 0.93
Pcdhb8Q91XZ2 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.89■□□□□ 0.93
Pcdhb8Q91XZ2 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb8Q91XZ2 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.89■□□□□ 0.93
Pcdhb8Q91XZ2 Gm5786-201ENSMUST00000085368 882 ntBASIC20.89■□□□□ 0.93
Pcdhb8Q91XZ2 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb8Q91XZ2 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.89■□□□□ 0.93
Pcdhb8Q91XZ2 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb8Q91XZ2 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb8Q91XZ2 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb8Q91XZ2 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb8Q91XZ2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb8Q91XZ2 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Pcdhb8Q91XZ2 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.88■□□□□ 0.93
Pcdhb8Q91XZ2 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb8Q91XZ2 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Pcdhb8Q91XZ2 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb8Q91XZ2 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
Pcdhb8Q91XZ2 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb8Q91XZ2 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb8Q91XZ2 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb8Q91XZ2 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb8Q91XZ2 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb8Q91XZ2 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb8Q91XZ2 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb8Q91XZ2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb8Q91XZ2 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.87■□□□□ 0.93
Pcdhb8Q91XZ2 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb8Q91XZ2 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb8Q91XZ2 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb8Q91XZ2 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb8Q91XZ2 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb8Q91XZ2 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb8Q91XZ2 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Pcdhb8Q91XZ2 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb8Q91XZ2 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb8Q91XZ2 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb8Q91XZ2 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb8Q91XZ2 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.85■□□□□ 0.93
Pcdhb8Q91XZ2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb8Q91XZ2 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Pcdhb8Q91XZ2 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Pcdhb8Q91XZ2 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Pcdhb8Q91XZ2 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.84■□□□□ 0.93
Pcdhb8Q91XZ2 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.84■□□□□ 0.93
Pcdhb8Q91XZ2 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb8Q91XZ2 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb8Q91XZ2 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb8Q91XZ2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Pcdhb8Q91XZ2 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pcdhb8Q91XZ2 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Pcdhb8Q91XZ2 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb8Q91XZ2 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb8Q91XZ2 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb8Q91XZ2 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb8Q91XZ2 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.82■□□□□ 0.92
Pcdhb8Q91XZ2 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb8Q91XZ2 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb8Q91XZ2 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb8Q91XZ2 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pcdhb8Q91XZ2 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb8Q91XZ2 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb8Q91XZ2 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb8Q91XZ2 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.81■□□□□ 0.92
Pcdhb8Q91XZ2 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb8Q91XZ2 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pcdhb8Q91XZ2 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
Pcdhb8Q91XZ2 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb8Q91XZ2 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb8Q91XZ2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pcdhb8Q91XZ2 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.8■□□□□ 0.92
Pcdhb8Q91XZ2 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms