Protein–RNA interactions for Protein: Q91WA3

Hdac11, Histone deacetylase 11, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac11Q91WA3 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hdac11Q91WA3 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hdac11Q91WA3 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Hdac11Q91WA3 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hdac11Q91WA3 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.23■□□□□ 0.99
Hdac11Q91WA3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hdac11Q91WA3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hdac11Q91WA3 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Hdac11Q91WA3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hdac11Q91WA3 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.23■□□□□ 0.99
Hdac11Q91WA3 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Hdac11Q91WA3 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Hdac11Q91WA3 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Hdac11Q91WA3 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hdac11Q91WA3 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hdac11Q91WA3 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hdac11Q91WA3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Hdac11Q91WA3 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hdac11Q91WA3 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.2■□□□□ 0.99
Hdac11Q91WA3 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Hdac11Q91WA3 Cap2-205ENSMUST00000225824 1634 ntBASIC21.2■□□□□ 0.98
Hdac11Q91WA3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hdac11Q91WA3 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hdac11Q91WA3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
Hdac11Q91WA3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hdac11Q91WA3 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hdac11Q91WA3 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hdac11Q91WA3 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hdac11Q91WA3 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Hdac11Q91WA3 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.18■□□□□ 0.98
Hdac11Q91WA3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hdac11Q91WA3 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Hdac11Q91WA3 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hdac11Q91WA3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC21.18■□□□□ 0.98
Hdac11Q91WA3 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hdac11Q91WA3 Gm22567-201ENSMUST00000175542 342 ntBASIC21.18■□□□□ 0.98
Hdac11Q91WA3 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Hdac11Q91WA3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.18■□□□□ 0.98
Hdac11Q91WA3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hdac11Q91WA3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.18■□□□□ 0.98
Hdac11Q91WA3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hdac11Q91WA3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hdac11Q91WA3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Hdac11Q91WA3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
Hdac11Q91WA3 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Hdac11Q91WA3 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hdac11Q91WA3 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hdac11Q91WA3 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC21.17■□□□□ 0.98
Hdac11Q91WA3 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hdac11Q91WA3 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hdac11Q91WA3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hdac11Q91WA3 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Hdac11Q91WA3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hdac11Q91WA3 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Hdac11Q91WA3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.16■□□□□ 0.98
Hdac11Q91WA3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hdac11Q91WA3 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hdac11Q91WA3 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.15■□□□□ 0.98
Hdac11Q91WA3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hdac11Q91WA3 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Hdac11Q91WA3 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.15■□□□□ 0.98
Hdac11Q91WA3 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hdac11Q91WA3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hdac11Q91WA3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Hdac11Q91WA3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Hdac11Q91WA3 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hdac11Q91WA3 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Hdac11Q91WA3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
Hdac11Q91WA3 Gm10420-201ENSMUST00000121713 882 ntBASIC21.14■□□□□ 0.97
Hdac11Q91WA3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Hdac11Q91WA3 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hdac11Q91WA3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hdac11Q91WA3 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hdac11Q91WA3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Hdac11Q91WA3 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hdac11Q91WA3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hdac11Q91WA3 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Hdac11Q91WA3 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Hdac11Q91WA3 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Hdac11Q91WA3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Hdac11Q91WA3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.12■□□□□ 0.97
Hdac11Q91WA3 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.12■□□□□ 0.97
Hdac11Q91WA3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Hdac11Q91WA3 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Hdac11Q91WA3 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hdac11Q91WA3 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hdac11Q91WA3 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC21.11■□□□□ 0.97
Hdac11Q91WA3 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Hdac11Q91WA3 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hdac11Q91WA3 AC117245.4-201ENSMUST00000217388 1646 ntBASIC21.11■□□□□ 0.97
Hdac11Q91WA3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hdac11Q91WA3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hdac11Q91WA3 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hdac11Q91WA3 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hdac11Q91WA3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hdac11Q91WA3 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hdac11Q91WA3 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hdac11Q91WA3 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hdac11Q91WA3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Hdac11Q91WA3 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms