Protein–RNA interactions for Protein: Q8VC66

Ssx2ip, Afadin- and alpha-actinin-binding protein, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx2ipQ8VC66 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21.86■■□□□ 1.09
Ssx2ipQ8VC66 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.86■■□□□ 1.09
Ssx2ipQ8VC66 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Ssx2ipQ8VC66 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ssx2ipQ8VC66 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ssx2ipQ8VC66 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Ssx2ipQ8VC66 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.85■■□□□ 1.09
Ssx2ipQ8VC66 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Ssx2ipQ8VC66 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ssx2ipQ8VC66 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ssx2ipQ8VC66 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Ssx2ipQ8VC66 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ssx2ipQ8VC66 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ssx2ipQ8VC66 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ssx2ipQ8VC66 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Ssx2ipQ8VC66 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC21.83■■□□□ 1.08
Ssx2ipQ8VC66 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Ssx2ipQ8VC66 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ssx2ipQ8VC66 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ssx2ipQ8VC66 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Ssx2ipQ8VC66 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Ssx2ipQ8VC66 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC21.82■■□□□ 1.08
Ssx2ipQ8VC66 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.82■■□□□ 1.08
Ssx2ipQ8VC66 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Ssx2ipQ8VC66 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ssx2ipQ8VC66 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Ssx2ipQ8VC66 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
Ssx2ipQ8VC66 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ssx2ipQ8VC66 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Ssx2ipQ8VC66 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ssx2ipQ8VC66 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Ssx2ipQ8VC66 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ssx2ipQ8VC66 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ssx2ipQ8VC66 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ssx2ipQ8VC66 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ssx2ipQ8VC66 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Ssx2ipQ8VC66 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ssx2ipQ8VC66 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ssx2ipQ8VC66 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
Ssx2ipQ8VC66 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Ssx2ipQ8VC66 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Ssx2ipQ8VC66 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ssx2ipQ8VC66 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ssx2ipQ8VC66 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Ssx2ipQ8VC66 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ssx2ipQ8VC66 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
Ssx2ipQ8VC66 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Ssx2ipQ8VC66 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.78■■□□□ 1.08
Ssx2ipQ8VC66 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Ssx2ipQ8VC66 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ssx2ipQ8VC66 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.77■■□□□ 1.08
Ssx2ipQ8VC66 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ssx2ipQ8VC66 Gm10420-201ENSMUST00000121713 882 ntBASIC21.77■■□□□ 1.08
Ssx2ipQ8VC66 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ssx2ipQ8VC66 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ssx2ipQ8VC66 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ssx2ipQ8VC66 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ssx2ipQ8VC66 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ssx2ipQ8VC66 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ssx2ipQ8VC66 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ssx2ipQ8VC66 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.76■■□□□ 1.07
Ssx2ipQ8VC66 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Ssx2ipQ8VC66 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Ssx2ipQ8VC66 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ssx2ipQ8VC66 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ssx2ipQ8VC66 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.75■■□□□ 1.07
Ssx2ipQ8VC66 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Ssx2ipQ8VC66 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ssx2ipQ8VC66 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ssx2ipQ8VC66 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ssx2ipQ8VC66 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ssx2ipQ8VC66 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Ssx2ipQ8VC66 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ssx2ipQ8VC66 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.74■■□□□ 1.07
Ssx2ipQ8VC66 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ssx2ipQ8VC66 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.74■■□□□ 1.07
Ssx2ipQ8VC66 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ssx2ipQ8VC66 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ssx2ipQ8VC66 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Ssx2ipQ8VC66 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ssx2ipQ8VC66 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ssx2ipQ8VC66 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Ssx2ipQ8VC66 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ssx2ipQ8VC66 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ssx2ipQ8VC66 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ssx2ipQ8VC66 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
Ssx2ipQ8VC66 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC21.73■■□□□ 1.07
Ssx2ipQ8VC66 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ssx2ipQ8VC66 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ssx2ipQ8VC66 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Ssx2ipQ8VC66 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ssx2ipQ8VC66 Gm5067-201ENSMUST00000170449 1009 ntBASIC21.72■■□□□ 1.07
Ssx2ipQ8VC66 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Ssx2ipQ8VC66 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Ssx2ipQ8VC66 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ssx2ipQ8VC66 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ssx2ipQ8VC66 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Ssx2ipQ8VC66 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ssx2ipQ8VC66 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ssx2ipQ8VC66 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms