Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim50Q810I2 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim50Q810I2 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trim50Q810I2 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim50Q810I2 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim50Q810I2 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
Trim50Q810I2 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.88■□□□□ 0.93
Trim50Q810I2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Trim50Q810I2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Trim50Q810I2 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim50Q810I2 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Trim50Q810I2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim50Q810I2 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim50Q810I2 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim50Q810I2 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trim50Q810I2 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
Trim50Q810I2 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Trim50Q810I2 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.87■□□□□ 0.93
Trim50Q810I2 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trim50Q810I2 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.87■□□□□ 0.93
Trim50Q810I2 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim50Q810I2 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Trim50Q810I2 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trim50Q810I2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Trim50Q810I2 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Trim50Q810I2 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trim50Q810I2 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim50Q810I2 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim50Q810I2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.86■□□□□ 0.93
Trim50Q810I2 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Trim50Q810I2 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.86■□□□□ 0.93
Trim50Q810I2 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trim50Q810I2 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.86■□□□□ 0.93
Trim50Q810I2 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trim50Q810I2 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim50Q810I2 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim50Q810I2 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trim50Q810I2 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim50Q810I2 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Trim50Q810I2 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim50Q810I2 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim50Q810I2 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trim50Q810I2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
Trim50Q810I2 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Trim50Q810I2 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Trim50Q810I2 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.83■□□□□ 0.92
Trim50Q810I2 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim50Q810I2 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.82■□□□□ 0.92
Trim50Q810I2 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.82■□□□□ 0.92
Trim50Q810I2 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trim50Q810I2 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trim50Q810I2 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim50Q810I2 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.81■□□□□ 0.92
Trim50Q810I2 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Trim50Q810I2 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trim50Q810I2 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trim50Q810I2 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.81■□□□□ 0.92
Trim50Q810I2 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Trim50Q810I2 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim50Q810I2 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trim50Q810I2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.8■□□□□ 0.92
Trim50Q810I2 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim50Q810I2 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim50Q810I2 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim50Q810I2 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.8■□□□□ 0.92
Trim50Q810I2 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim50Q810I2 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim50Q810I2 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trim50Q810I2 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim50Q810I2 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.79■□□□□ 0.92
Trim50Q810I2 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Trim50Q810I2 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim50Q810I2 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Trim50Q810I2 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Trim50Q810I2 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Trim50Q810I2 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Trim50Q810I2 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim50Q810I2 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim50Q810I2 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trim50Q810I2 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC20.78■□□□□ 0.92
Trim50Q810I2 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
Trim50Q810I2 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Trim50Q810I2 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.78■□□□□ 0.92
Trim50Q810I2 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trim50Q810I2 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim50Q810I2 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
Trim50Q810I2 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim50Q810I2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim50Q810I2 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.77■□□□□ 0.92
Trim50Q810I2 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trim50Q810I2 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trim50Q810I2 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Trim50Q810I2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Trim50Q810I2 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.77■□□□□ 0.91
Trim50Q810I2 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.76■□□□□ 0.91
Trim50Q810I2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
Trim50Q810I2 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Trim50Q810I2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.76■□□□□ 0.91
Trim50Q810I2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trim50Q810I2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 98.3 ms