Protein–RNA interactions for Protein: Q80X56

Trim69, E3 ubiquitin-protein ligase TRIM69, mousemouse

Predictions only

Length 500 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim69Q80X56 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim69Q80X56 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Trim69Q80X56 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim69Q80X56 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.37■□□□□ 0.85
Trim69Q80X56 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.37■□□□□ 0.85
Trim69Q80X56 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim69Q80X56 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Trim69Q80X56 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim69Q80X56 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Trim69Q80X56 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.36■□□□□ 0.85
Trim69Q80X56 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.36■□□□□ 0.85
Trim69Q80X56 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.36■□□□□ 0.85
Trim69Q80X56 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim69Q80X56 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.36■□□□□ 0.85
Trim69Q80X56 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim69Q80X56 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim69Q80X56 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim69Q80X56 Gm15039-201ENSMUST00000118914 875 ntBASIC20.35■□□□□ 0.85
Trim69Q80X56 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.35■□□□□ 0.85
Trim69Q80X56 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.35■□□□□ 0.85
Trim69Q80X56 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim69Q80X56 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim69Q80X56 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim69Q80X56 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim69Q80X56 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.34■□□□□ 0.85
Trim69Q80X56 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim69Q80X56 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Trim69Q80X56 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.34■□□□□ 0.85
Trim69Q80X56 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.34■□□□□ 0.85
Trim69Q80X56 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim69Q80X56 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim69Q80X56 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim69Q80X56 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim69Q80X56 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trim69Q80X56 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.32■□□□□ 0.84
Trim69Q80X56 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim69Q80X56 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim69Q80X56 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trim69Q80X56 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
Trim69Q80X56 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
Trim69Q80X56 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Trim69Q80X56 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim69Q80X56 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.31■□□□□ 0.84
Trim69Q80X56 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trim69Q80X56 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim69Q80X56 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim69Q80X56 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim69Q80X56 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim69Q80X56 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trim69Q80X56 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trim69Q80X56 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim69Q80X56 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim69Q80X56 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.3■□□□□ 0.84
Trim69Q80X56 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.3■□□□□ 0.84
Trim69Q80X56 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.3■□□□□ 0.84
Trim69Q80X56 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim69Q80X56 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim69Q80X56 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim69Q80X56 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim69Q80X56 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.29■□□□□ 0.84
Trim69Q80X56 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.29■□□□□ 0.84
Trim69Q80X56 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
Trim69Q80X56 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Trim69Q80X56 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim69Q80X56 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Trim69Q80X56 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim69Q80X56 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trim69Q80X56 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim69Q80X56 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim69Q80X56 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.28■□□□□ 0.84
Trim69Q80X56 Gm7417-201ENSMUST00000192950 473 ntBASIC20.28■□□□□ 0.84
Trim69Q80X56 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.28■□□□□ 0.84
Trim69Q80X56 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.28■□□□□ 0.84
Trim69Q80X56 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim69Q80X56 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Trim69Q80X56 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Trim69Q80X56 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.27■□□□□ 0.84
Trim69Q80X56 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.27■□□□□ 0.84
Trim69Q80X56 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim69Q80X56 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trim69Q80X56 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim69Q80X56 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim69Q80X56 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Trim69Q80X56 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim69Q80X56 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim69Q80X56 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.26■□□□□ 0.83
Trim69Q80X56 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim69Q80X56 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.25■□□□□ 0.83
Trim69Q80X56 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.25■□□□□ 0.83
Trim69Q80X56 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.25■□□□□ 0.83
Trim69Q80X56 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.25■□□□□ 0.83
Trim69Q80X56 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.25■□□□□ 0.83
Trim69Q80X56 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
Trim69Q80X56 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim69Q80X56 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim69Q80X56 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Trim69Q80X56 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim69Q80X56 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim69Q80X56 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trim69Q80X56 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms