Protein–RNA interactions for Protein: Q62177

Sema3b, Semaphorin-3B, mousemouse

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3bQ62177 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Sema3bQ62177 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sema3bQ62177 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sema3bQ62177 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.37■□□□□ 0.85
Sema3bQ62177 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Sema3bQ62177 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sema3bQ62177 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Sema3bQ62177 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sema3bQ62177 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sema3bQ62177 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.36■□□□□ 0.85
Sema3bQ62177 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.36■□□□□ 0.85
Sema3bQ62177 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.36■□□□□ 0.85
Sema3bQ62177 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sema3bQ62177 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sema3bQ62177 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sema3bQ62177 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sema3bQ62177 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.36■□□□□ 0.85
Sema3bQ62177 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Sema3bQ62177 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sema3bQ62177 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sema3bQ62177 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sema3bQ62177 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sema3bQ62177 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.35■□□□□ 0.85
Sema3bQ62177 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sema3bQ62177 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Sema3bQ62177 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.34■□□□□ 0.85
Sema3bQ62177 Gm22238-201ENSMUST00000175222 88 ntBASIC20.34■□□□□ 0.85
Sema3bQ62177 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20.34■□□□□ 0.85
Sema3bQ62177 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sema3bQ62177 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sema3bQ62177 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sema3bQ62177 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sema3bQ62177 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
Sema3bQ62177 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sema3bQ62177 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Sema3bQ62177 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.33■□□□□ 0.85
Sema3bQ62177 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Sema3bQ62177 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Sema3bQ62177 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sema3bQ62177 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sema3bQ62177 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.32■□□□□ 0.84
Sema3bQ62177 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sema3bQ62177 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sema3bQ62177 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sema3bQ62177 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.32■□□□□ 0.84
Sema3bQ62177 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sema3bQ62177 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Sema3bQ62177 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sema3bQ62177 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sema3bQ62177 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Sema3bQ62177 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.31■□□□□ 0.84
Sema3bQ62177 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.31■□□□□ 0.84
Sema3bQ62177 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.31■□□□□ 0.84
Sema3bQ62177 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Sema3bQ62177 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sema3bQ62177 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Sema3bQ62177 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sema3bQ62177 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sema3bQ62177 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Sema3bQ62177 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sema3bQ62177 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sema3bQ62177 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.3■□□□□ 0.84
Sema3bQ62177 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Sema3bQ62177 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Sema3bQ62177 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.29■□□□□ 0.84
Sema3bQ62177 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.29■□□□□ 0.84
Sema3bQ62177 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sema3bQ62177 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sema3bQ62177 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sema3bQ62177 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
Sema3bQ62177 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.28■□□□□ 0.84
Sema3bQ62177 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Sema3bQ62177 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.28■□□□□ 0.84
Sema3bQ62177 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Sema3bQ62177 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sema3bQ62177 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sema3bQ62177 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Sema3bQ62177 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sema3bQ62177 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sema3bQ62177 Gm12922-201ENSMUST00000120626 809 ntBASIC20.26■□□□□ 0.83
Sema3bQ62177 Gm40881-201ENSMUST00000223397 166 ntBASIC20.26■□□□□ 0.83
Sema3bQ62177 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.26■□□□□ 0.83
Sema3bQ62177 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sema3bQ62177 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Sema3bQ62177 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sema3bQ62177 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Sema3bQ62177 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.25■□□□□ 0.83
Sema3bQ62177 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Sema3bQ62177 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sema3bQ62177 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Sema3bQ62177 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sema3bQ62177 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Sema3bQ62177 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.24■□□□□ 0.83
Sema3bQ62177 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sema3bQ62177 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sema3bQ62177 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Sema3bQ62177 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sema3bQ62177 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Sema3bQ62177 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Sema3bQ62177 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms