Protein–RNA interactions for Protein: Q61079

Sim2, Single-minded homolog 2, mousemouse

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim2Q61079 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Sim2Q61079 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Sim2Q61079 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.14■□□□□ 0.97
Sim2Q61079 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Sim2Q61079 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Sim2Q61079 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sim2Q61079 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.13■□□□□ 0.97
Sim2Q61079 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
Sim2Q61079 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sim2Q61079 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Sim2Q61079 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.13■□□□□ 0.97
Sim2Q61079 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.12■□□□□ 0.97
Sim2Q61079 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Sim2Q61079 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sim2Q61079 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sim2Q61079 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sim2Q61079 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Sim2Q61079 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sim2Q61079 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Sim2Q61079 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Sim2Q61079 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.09■□□□□ 0.97
Sim2Q61079 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.09■□□□□ 0.97
Sim2Q61079 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sim2Q61079 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sim2Q61079 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sim2Q61079 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sim2Q61079 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Sim2Q61079 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sim2Q61079 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.08■□□□□ 0.97
Sim2Q61079 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sim2Q61079 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sim2Q61079 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sim2Q61079 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sim2Q61079 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sim2Q61079 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sim2Q61079 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sim2Q61079 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sim2Q61079 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sim2Q61079 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sim2Q61079 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sim2Q61079 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.06■□□□□ 0.96
Sim2Q61079 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.06■□□□□ 0.96
Sim2Q61079 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.06■□□□□ 0.96
Sim2Q61079 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sim2Q61079 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sim2Q61079 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.06■□□□□ 0.96
Sim2Q61079 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sim2Q61079 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sim2Q61079 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Sim2Q61079 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Sim2Q61079 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.05■□□□□ 0.96
Sim2Q61079 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC21.05■□□□□ 0.96
Sim2Q61079 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.05■□□□□ 0.96
Sim2Q61079 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Sim2Q61079 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sim2Q61079 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Sim2Q61079 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.04■□□□□ 0.96
Sim2Q61079 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sim2Q61079 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sim2Q61079 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sim2Q61079 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sim2Q61079 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC21.03■□□□□ 0.96
Sim2Q61079 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.03■□□□□ 0.96
Sim2Q61079 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Sim2Q61079 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.03■□□□□ 0.96
Sim2Q61079 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.03■□□□□ 0.96
Sim2Q61079 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sim2Q61079 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sim2Q61079 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Sim2Q61079 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Sim2Q61079 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sim2Q61079 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Sim2Q61079 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sim2Q61079 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sim2Q61079 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sim2Q61079 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sim2Q61079 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21■□□□□ 0.95
Sim2Q61079 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sim2Q61079 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sim2Q61079 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sim2Q61079 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.99■□□□□ 0.95
Sim2Q61079 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.99■□□□□ 0.95
Sim2Q61079 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sim2Q61079 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
Sim2Q61079 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sim2Q61079 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Sim2Q61079 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sim2Q61079 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Sim2Q61079 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.99■□□□□ 0.95
Sim2Q61079 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sim2Q61079 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Sim2Q61079 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sim2Q61079 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.98■□□□□ 0.95
Sim2Q61079 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.98■□□□□ 0.95
Sim2Q61079 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.98■□□□□ 0.95
Sim2Q61079 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Sim2Q61079 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sim2Q61079 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sim2Q61079 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sim2Q61079 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms