Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
Col12a1Q60847 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Col12a1Q60847 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
Col12a1Q60847 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col12a1Q60847 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Col12a1Q60847 Gm26571-201ENSMUST00000181399 666 ntBASIC21.87■■□□□ 1.09
Col12a1Q60847 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Col12a1Q60847 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Col12a1Q60847 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col12a1Q60847 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col12a1Q60847 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col12a1Q60847 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Col12a1Q60847 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Col12a1Q60847 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.86■■□□□ 1.09
Col12a1Q60847 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.86■■□□□ 1.09
Col12a1Q60847 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC21.86■■□□□ 1.09
Col12a1Q60847 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Col12a1Q60847 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Col12a1Q60847 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Col12a1Q60847 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Col12a1Q60847 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Col12a1Q60847 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
Col12a1Q60847 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Col12a1Q60847 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Col12a1Q60847 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Col12a1Q60847 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Col12a1Q60847 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.85■■□□□ 1.09
Col12a1Q60847 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col12a1Q60847 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.85■■□□□ 1.09
Col12a1Q60847 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Col12a1Q60847 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.85■■□□□ 1.09
Col12a1Q60847 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.85■■□□□ 1.09
Col12a1Q60847 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col12a1Q60847 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.85■■□□□ 1.09
Col12a1Q60847 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Col12a1Q60847 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Col12a1Q60847 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col12a1Q60847 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.84■■□□□ 1.09
Col12a1Q60847 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col12a1Q60847 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col12a1Q60847 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col12a1Q60847 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col12a1Q60847 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.84■■□□□ 1.09
Col12a1Q60847 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Col12a1Q60847 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col12a1Q60847 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Col12a1Q60847 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Col12a1Q60847 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Col12a1Q60847 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Col12a1Q60847 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.82■■□□□ 1.08
Col12a1Q60847 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col12a1Q60847 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Col12a1Q60847 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Col12a1Q60847 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Col12a1Q60847 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Col12a1Q60847 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col12a1Q60847 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Col12a1Q60847 Gm10849-201ENSMUST00000100397 618 ntBASIC21.81■■□□□ 1.08
Col12a1Q60847 Gm7291-201ENSMUST00000199147 382 ntBASIC21.81■■□□□ 1.08
Col12a1Q60847 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Col12a1Q60847 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.8■■□□□ 1.08
Col12a1Q60847 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Col12a1Q60847 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col12a1Q60847 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Col12a1Q60847 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Col12a1Q60847 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC21.8■■□□□ 1.08
Col12a1Q60847 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col12a1Q60847 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col12a1Q60847 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Col12a1Q60847 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Col12a1Q60847 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.79■■□□□ 1.08
Col12a1Q60847 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
Col12a1Q60847 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col12a1Q60847 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.78■■□□□ 1.08
Col12a1Q60847 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Col12a1Q60847 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.78■■□□□ 1.08
Col12a1Q60847 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Col12a1Q60847 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Col12a1Q60847 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Col12a1Q60847 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Col12a1Q60847 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.76■■□□□ 1.07
Col12a1Q60847 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Col12a1Q60847 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
Col12a1Q60847 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Col12a1Q60847 Gm43017-201ENSMUST00000198296 752 ntBASIC21.76■■□□□ 1.07
Col12a1Q60847 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Col12a1Q60847 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.76■■□□□ 1.07
Col12a1Q60847 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col12a1Q60847 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col12a1Q60847 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
Col12a1Q60847 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col12a1Q60847 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col12a1Q60847 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col12a1Q60847 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col12a1Q60847 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Col12a1Q60847 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.75■■□□□ 1.07
Col12a1Q60847 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Col12a1Q60847 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Col12a1Q60847 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.74■■□□□ 1.07
Col12a1Q60847 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms