Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.07■□□□□ 0.32
Trav2Q5R1I9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav2Q5R1I9 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.07■□□□□ 0.32
Trav2Q5R1I9 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav2Q5R1I9 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav2Q5R1I9 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav2Q5R1I9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav2Q5R1I9 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav2Q5R1I9 Gm45102-201ENSMUST00000207427 857 ntBASIC17.06■□□□□ 0.32
Trav2Q5R1I9 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.06■□□□□ 0.32
Trav2Q5R1I9 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.06■□□□□ 0.32
Trav2Q5R1I9 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav2Q5R1I9 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Trav2Q5R1I9 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav2Q5R1I9 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav2Q5R1I9 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav2Q5R1I9 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trav2Q5R1I9 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav2Q5R1I9 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav2Q5R1I9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.05■□□□□ 0.32
Trav2Q5R1I9 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.05■□□□□ 0.32
Trav2Q5R1I9 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.05■□□□□ 0.32
Trav2Q5R1I9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav2Q5R1I9 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav2Q5R1I9 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav2Q5R1I9 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trav2Q5R1I9 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav2Q5R1I9 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.04■□□□□ 0.32
Trav2Q5R1I9 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.04■□□□□ 0.32
Trav2Q5R1I9 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav2Q5R1I9 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav2Q5R1I9 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav2Q5R1I9 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav2Q5R1I9 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav2Q5R1I9 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Trav2Q5R1I9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.03■□□□□ 0.32
Trav2Q5R1I9 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav2Q5R1I9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
Trav2Q5R1I9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav2Q5R1I9 Gm9959-201ENSMUST00000068277 390 ntBASIC17.03■□□□□ 0.32
Trav2Q5R1I9 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav2Q5R1I9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav2Q5R1I9 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.02■□□□□ 0.32
Trav2Q5R1I9 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav2Q5R1I9 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Trav2Q5R1I9 Gm14117-201ENSMUST00000122417 843 ntBASIC17.02■□□□□ 0.32
Trav2Q5R1I9 Etf1-202ENSMUST00000180351 108 ntBASIC17.02■□□□□ 0.32
Trav2Q5R1I9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.02■□□□□ 0.32
Trav2Q5R1I9 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Trav2Q5R1I9 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav2Q5R1I9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav2Q5R1I9 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav2Q5R1I9 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Trav2Q5R1I9 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav2Q5R1I9 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Trav2Q5R1I9 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.01■□□□□ 0.31
Trav2Q5R1I9 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav2Q5R1I9 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav2Q5R1I9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Trav2Q5R1I9 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav2Q5R1I9 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Trav2Q5R1I9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17■□□□□ 0.31
Trav2Q5R1I9 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17■□□□□ 0.31
Trav2Q5R1I9 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Trav2Q5R1I9 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Trav2Q5R1I9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav2Q5R1I9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC16.99■□□□□ 0.31
Trav2Q5R1I9 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav2Q5R1I9 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav2Q5R1I9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav2Q5R1I9 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav2Q5R1I9 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Trav2Q5R1I9 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Trav2Q5R1I9 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav2Q5R1I9 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Trav2Q5R1I9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Trav2Q5R1I9 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav2Q5R1I9 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav2Q5R1I9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav2Q5R1I9 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.98■□□□□ 0.31
Trav2Q5R1I9 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC16.98■□□□□ 0.31
Trav2Q5R1I9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav2Q5R1I9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav2Q5R1I9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav2Q5R1I9 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav2Q5R1I9 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav2Q5R1I9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav2Q5R1I9 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Trav2Q5R1I9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav2Q5R1I9 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav2Q5R1I9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav2Q5R1I9 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav2Q5R1I9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Trav2Q5R1I9 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav2Q5R1I9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Trav2Q5R1I9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav2Q5R1I9 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Trav2Q5R1I9 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
Trav2Q5R1I9 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Trav2Q5R1I9 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms