Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC16.65■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav15-1-dv6-1Q5R1D2 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 AC122317.2-201ENSMUST00000218708 1248 ntBASIC16.64■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC16.64■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC16.64■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Gm42418-201ENSMUST00000182010 1831 ntBASIC16.63■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC16.62■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC16.61■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC16.6■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.59■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC16.59■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.58■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Trav15-1-dv6-1Q5R1D2 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC16.58■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Terc-201ENSMUST00000082862 423 ntBASIC16.58■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC16.57■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Gm12818-201ENSMUST00000117562 1349 ntBASIC16.57■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.57■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC16.57■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC16.56■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 AC117245.4-201ENSMUST00000217388 1646 ntBASIC16.56■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.55■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC16.55■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms