Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Vps13aQ5H8C4 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.88■■□□□ 1.09
Vps13aQ5H8C4 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Vps13aQ5H8C4 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.88■■□□□ 1.09
Vps13aQ5H8C4 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
Vps13aQ5H8C4 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Vps13aQ5H8C4 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC21.87■■□□□ 1.09
Vps13aQ5H8C4 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps13aQ5H8C4 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps13aQ5H8C4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Vps13aQ5H8C4 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.87■■□□□ 1.09
Vps13aQ5H8C4 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Vps13aQ5H8C4 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Vps13aQ5H8C4 Gm10849-201ENSMUST00000100397 618 ntBASIC21.86■■□□□ 1.09
Vps13aQ5H8C4 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
Vps13aQ5H8C4 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Vps13aQ5H8C4 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Vps13aQ5H8C4 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Vps13aQ5H8C4 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Vps13aQ5H8C4 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Vps13aQ5H8C4 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC21.86■■□□□ 1.09
Vps13aQ5H8C4 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Vps13aQ5H8C4 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Vps13aQ5H8C4 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
Vps13aQ5H8C4 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vps13aQ5H8C4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vps13aQ5H8C4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Vps13aQ5H8C4 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Vps13aQ5H8C4 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
Vps13aQ5H8C4 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC21.85■■□□□ 1.09
Vps13aQ5H8C4 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps13aQ5H8C4 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps13aQ5H8C4 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Vps13aQ5H8C4 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps13aQ5H8C4 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps13aQ5H8C4 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps13aQ5H8C4 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vps13aQ5H8C4 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Vps13aQ5H8C4 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Vps13aQ5H8C4 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vps13aQ5H8C4 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vps13aQ5H8C4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vps13aQ5H8C4 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Vps13aQ5H8C4 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Vps13aQ5H8C4 AC153524.1-201ENSMUST00000220436 1935 ntBASIC21.83■■□□□ 1.08
Vps13aQ5H8C4 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.82■■□□□ 1.08
Vps13aQ5H8C4 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Vps13aQ5H8C4 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC21.82■■□□□ 1.08
Vps13aQ5H8C4 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC21.82■■□□□ 1.08
Vps13aQ5H8C4 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vps13aQ5H8C4 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
Vps13aQ5H8C4 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vps13aQ5H8C4 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vps13aQ5H8C4 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vps13aQ5H8C4 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Vps13aQ5H8C4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Vps13aQ5H8C4 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vps13aQ5H8C4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Vps13aQ5H8C4 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vps13aQ5H8C4 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC21.81■■□□□ 1.08
Vps13aQ5H8C4 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Vps13aQ5H8C4 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Vps13aQ5H8C4 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Vps13aQ5H8C4 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Vps13aQ5H8C4 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Vps13aQ5H8C4 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Vps13aQ5H8C4 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Vps13aQ5H8C4 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Vps13aQ5H8C4 Gm10399-202ENSMUST00000202768 748 ntBASIC21.8■■□□□ 1.08
Vps13aQ5H8C4 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC21.8■■□□□ 1.08
Vps13aQ5H8C4 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Vps13aQ5H8C4 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.8■■□□□ 1.08
Vps13aQ5H8C4 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.79■■□□□ 1.08
Vps13aQ5H8C4 Gm7291-201ENSMUST00000199147 382 ntBASIC21.79■■□□□ 1.08
Vps13aQ5H8C4 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Vps13aQ5H8C4 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.79■■□□□ 1.08
Vps13aQ5H8C4 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Vps13aQ5H8C4 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.79■■□□□ 1.08
Vps13aQ5H8C4 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Vps13aQ5H8C4 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vps13aQ5H8C4 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vps13aQ5H8C4 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vps13aQ5H8C4 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vps13aQ5H8C4 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vps13aQ5H8C4 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Vps13aQ5H8C4 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Vps13aQ5H8C4 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Vps13aQ5H8C4 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vps13aQ5H8C4 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.77■■□□□ 1.08
Vps13aQ5H8C4 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Vps13aQ5H8C4 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC21.77■■□□□ 1.07
Vps13aQ5H8C4 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
Vps13aQ5H8C4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Vps13aQ5H8C4 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.77■■□□□ 1.07
Vps13aQ5H8C4 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vps13aQ5H8C4 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vps13aQ5H8C4 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
Vps13aQ5H8C4 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Vps13aQ5H8C4 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vps13aQ5H8C4 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms