Protein–RNA interactions for Protein: Q3KNL4

UPF0728 protein C10orf53 homolog, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3KNL4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.01■□□□□ 0.95
Q3KNL4 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Q3KNL4 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Q3KNL4 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Q3KNL4 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21■□□□□ 0.95
Q3KNL4 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Q3KNL4 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Q3KNL4 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Q3KNL4 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21■□□□□ 0.95
Q3KNL4 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Q3KNL4 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Q3KNL4 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Q3KNL4 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Q3KNL4 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Q3KNL4 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Q3KNL4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.99■□□□□ 0.95
Q3KNL4 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Q3KNL4 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Q3KNL4 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.99■□□□□ 0.95
Q3KNL4 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Q3KNL4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.98■□□□□ 0.95
Q3KNL4 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Q3KNL4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Q3KNL4 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Q3KNL4 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Q3KNL4 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Q3KNL4 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Q3KNL4 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Q3KNL4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Q3KNL4 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.97■□□□□ 0.95
Q3KNL4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Q3KNL4 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Q3KNL4 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Q3KNL4 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Q3KNL4 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Q3KNL4 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Q3KNL4 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Q3KNL4 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Q3KNL4 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Q3KNL4 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Q3KNL4 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Q3KNL4 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.96■□□□□ 0.95
Q3KNL4 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Q3KNL4 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Q3KNL4 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
Q3KNL4 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Q3KNL4 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Q3KNL4 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Q3KNL4 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Q3KNL4 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Q3KNL4 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.95■□□□□ 0.94
Q3KNL4 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Q3KNL4 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Q3KNL4 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Q3KNL4 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Q3KNL4 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Q3KNL4 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Q3KNL4 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Q3KNL4 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Q3KNL4 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Q3KNL4 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
Q3KNL4 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Q3KNL4 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.93■□□□□ 0.94
Q3KNL4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Q3KNL4 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.93■□□□□ 0.94
Q3KNL4 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.93■□□□□ 0.94
Q3KNL4 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Q3KNL4 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Q3KNL4 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Q3KNL4 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Q3KNL4 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Q3KNL4 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Q3KNL4 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Q3KNL4 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Q3KNL4 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.92■□□□□ 0.94
Q3KNL4 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Q3KNL4 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Q3KNL4 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Q3KNL4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.91■□□□□ 0.94
Q3KNL4 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Q3KNL4 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Q3KNL4 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Q3KNL4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Q3KNL4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Q3KNL4 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Q3KNL4 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Q3KNL4 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
Q3KNL4 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.9■□□□□ 0.94
Q3KNL4 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Q3KNL4 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.9■□□□□ 0.94
Q3KNL4 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Q3KNL4 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Q3KNL4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Q3KNL4 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.9■□□□□ 0.94
Q3KNL4 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Q3KNL4 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Q3KNL4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Q3KNL4 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Q3KNL4 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Q3KNL4 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms