Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sox4Q06831 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Sox4Q06831 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Sox4Q06831 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sox4Q06831 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sox4Q06831 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sox4Q06831 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Sox4Q06831 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sox4Q06831 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
Sox4Q06831 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Sox4Q06831 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sox4Q06831 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sox4Q06831 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sox4Q06831 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.11■□□□□ 0.97
Sox4Q06831 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Sox4Q06831 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.1■□□□□ 0.97
Sox4Q06831 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Sox4Q06831 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
Sox4Q06831 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Sox4Q06831 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sox4Q06831 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Sox4Q06831 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Sox4Q06831 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC21.09■□□□□ 0.97
Sox4Q06831 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sox4Q06831 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sox4Q06831 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
Sox4Q06831 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sox4Q06831 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Sox4Q06831 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Sox4Q06831 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Sox4Q06831 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.08■□□□□ 0.97
Sox4Q06831 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Sox4Q06831 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
Sox4Q06831 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sox4Q06831 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Sox4Q06831 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.07■□□□□ 0.96
Sox4Q06831 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sox4Q06831 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sox4Q06831 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sox4Q06831 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Sox4Q06831 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.07■□□□□ 0.96
Sox4Q06831 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Sox4Q06831 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sox4Q06831 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Sox4Q06831 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.06■□□□□ 0.96
Sox4Q06831 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sox4Q06831 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sox4Q06831 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sox4Q06831 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Sox4Q06831 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sox4Q06831 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sox4Q06831 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Sox4Q06831 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Sox4Q06831 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
Sox4Q06831 Gm15546-201ENSMUST00000122095 826 ntBASIC21.05■□□□□ 0.96
Sox4Q06831 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Sox4Q06831 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sox4Q06831 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Sox4Q06831 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sox4Q06831 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Sox4Q06831 Gm15820-201ENSMUST00000201566 728 ntBASIC21.04■□□□□ 0.96
Sox4Q06831 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC21.04■□□□□ 0.96
Sox4Q06831 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sox4Q06831 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Sox4Q06831 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Sox4Q06831 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.03■□□□□ 0.96
Sox4Q06831 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Sox4Q06831 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Sox4Q06831 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Sox4Q06831 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Sox4Q06831 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.02■□□□□ 0.96
Sox4Q06831 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sox4Q06831 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Sox4Q06831 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sox4Q06831 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.02■□□□□ 0.96
Sox4Q06831 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Sox4Q06831 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Sox4Q06831 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sox4Q06831 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Sox4Q06831 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Sox4Q06831 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Sox4Q06831 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC21.01■□□□□ 0.95
Sox4Q06831 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.01■□□□□ 0.95
Sox4Q06831 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Sox4Q06831 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sox4Q06831 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Sox4Q06831 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.01■□□□□ 0.95
Sox4Q06831 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Sox4Q06831 Gm11847-201ENSMUST00000125165 1119 ntBASIC21■□□□□ 0.95
Sox4Q06831 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21■□□□□ 0.95
Sox4Q06831 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Sox4Q06831 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
Sox4Q06831 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21■□□□□ 0.95
Sox4Q06831 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Sox4Q06831 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sox4Q06831 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sox4Q06831 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.99■□□□□ 0.95
Sox4Q06831 Gm10232-201ENSMUST00000089221 720 ntBASIC20.99■□□□□ 0.95
Sox4Q06831 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Sox4Q06831 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms