Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Smn1P97801 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smn1P97801 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smn1P97801 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Smn1P97801 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Smn1P97801 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smn1P97801 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.34■□□□□ 0.53
Smn1P97801 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smn1P97801 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Smn1P97801 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Smn1P97801 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smn1P97801 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Smn1P97801 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Smn1P97801 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Smn1P97801 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smn1P97801 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smn1P97801 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smn1P97801 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Smn1P97801 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smn1P97801 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smn1P97801 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Smn1P97801 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Smn1P97801 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Smn1P97801 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smn1P97801 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Smn1P97801 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Smn1P97801 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Smn1P97801 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smn1P97801 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Smn1P97801 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smn1P97801 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Smn1P97801 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.32■□□□□ 0.52
Smn1P97801 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Smn1P97801 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smn1P97801 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smn1P97801 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Smn1P97801 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Smn1P97801 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smn1P97801 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Smn1P97801 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Smn1P97801 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC18.31■□□□□ 0.52
Smn1P97801 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smn1P97801 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Smn1P97801 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smn1P97801 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smn1P97801 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smn1P97801 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Smn1P97801 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smn1P97801 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.3■□□□□ 0.52
Smn1P97801 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Smn1P97801 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smn1P97801 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smn1P97801 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Smn1P97801 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smn1P97801 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
Smn1P97801 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Smn1P97801 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Smn1P97801 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Smn1P97801 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.29■□□□□ 0.52
Smn1P97801 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Smn1P97801 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smn1P97801 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smn1P97801 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smn1P97801 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smn1P97801 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.28■□□□□ 0.52
Smn1P97801 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC18.28■□□□□ 0.52
Smn1P97801 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Smn1P97801 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smn1P97801 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smn1P97801 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Smn1P97801 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Smn1P97801 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smn1P97801 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Smn1P97801 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Smn1P97801 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Smn1P97801 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Smn1P97801 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Smn1P97801 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Smn1P97801 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
Smn1P97801 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Smn1P97801 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Smn1P97801 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smn1P97801 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Smn1P97801 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC18.25■□□□□ 0.51
Smn1P97801 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Smn1P97801 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.24■□□□□ 0.51
Smn1P97801 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.24■□□□□ 0.51
Smn1P97801 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.24■□□□□ 0.51
Smn1P97801 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smn1P97801 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Smn1P97801 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC18.24■□□□□ 0.51
Smn1P97801 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Smn1P97801 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smn1P97801 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smn1P97801 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smn1P97801 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smn1P97801 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Smn1P97801 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smn1P97801 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Smn1P97801 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 155.7 ms