Protein–RNA interactions for Protein: P70196

Traf6, TNF receptor-associated factor 6, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf6P70196 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Traf6P70196 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Traf6P70196 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Traf6P70196 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Traf6P70196 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Traf6P70196 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Traf6P70196 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Traf6P70196 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Traf6P70196 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.05■□□□□ 0.96
Traf6P70196 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Traf6P70196 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Traf6P70196 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Traf6P70196 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Traf6P70196 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Traf6P70196 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Traf6P70196 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Traf6P70196 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Traf6P70196 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.04■□□□□ 0.96
Traf6P70196 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Traf6P70196 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Traf6P70196 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Traf6P70196 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Traf6P70196 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.04■□□□□ 0.96
Traf6P70196 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
Traf6P70196 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Traf6P70196 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
Traf6P70196 Gm11175-201ENSMUST00000116172 543 ntBASIC21.03■□□□□ 0.96
Traf6P70196 Gm11687-201ENSMUST00000118911 886 ntBASIC21.03■□□□□ 0.96
Traf6P70196 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.03■□□□□ 0.96
Traf6P70196 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC21.02■□□□□ 0.96
Traf6P70196 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Traf6P70196 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Traf6P70196 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Traf6P70196 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Traf6P70196 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.01■□□□□ 0.95
Traf6P70196 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Traf6P70196 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Traf6P70196 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Traf6P70196 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.01■□□□□ 0.95
Traf6P70196 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Traf6P70196 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Traf6P70196 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Traf6P70196 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Traf6P70196 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Traf6P70196 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Traf6P70196 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Traf6P70196 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Traf6P70196 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Traf6P70196 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Traf6P70196 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.99■□□□□ 0.95
Traf6P70196 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Traf6P70196 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Traf6P70196 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.99■□□□□ 0.95
Traf6P70196 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Traf6P70196 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Traf6P70196 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.98■□□□□ 0.95
Traf6P70196 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Traf6P70196 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Traf6P70196 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Traf6P70196 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Traf6P70196 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Traf6P70196 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Traf6P70196 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Traf6P70196 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Traf6P70196 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Traf6P70196 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Traf6P70196 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Traf6P70196 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.96■□□□□ 0.95
Traf6P70196 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Traf6P70196 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Traf6P70196 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Traf6P70196 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.96■□□□□ 0.95
Traf6P70196 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Traf6P70196 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Traf6P70196 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Traf6P70196 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Traf6P70196 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Traf6P70196 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Traf6P70196 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Traf6P70196 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Traf6P70196 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Traf6P70196 Notumos-201ENSMUST00000151998 2659 ntBASIC20.94■□□□□ 0.94
Traf6P70196 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.94■□□□□ 0.94
Traf6P70196 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Traf6P70196 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.93■□□□□ 0.94
Traf6P70196 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Traf6P70196 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Traf6P70196 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Traf6P70196 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Traf6P70196 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Traf6P70196 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Traf6P70196 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Traf6P70196 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Traf6P70196 Gm27502-201ENSMUST00000183495 199 ntBASIC20.92■□□□□ 0.94
Traf6P70196 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Traf6P70196 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Traf6P70196 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Traf6P70196 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Traf6P70196 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Traf6P70196 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 204.3 ms