Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.1■□□□□ 0.01
Cks1bP61025 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cks1bP61025 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cks1bP61025 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cks1bP61025 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cks1bP61025 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cks1bP61025 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cks1bP61025 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cks1bP61025 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cks1bP61025 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cks1bP61025 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cks1bP61025 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Cks1bP61025 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cks1bP61025 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.08■□□□□ 0.01
Cks1bP61025 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cks1bP61025 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cks1bP61025 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Cks1bP61025 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Cks1bP61025 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Cks1bP61025 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cks1bP61025 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC15.07■□□□□ 0
Cks1bP61025 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Cks1bP61025 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC15.07■□□□□ 0
Cks1bP61025 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Cks1bP61025 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Cks1bP61025 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Cks1bP61025 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Cks1bP61025 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.07■□□□□ 0
Cks1bP61025 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Cks1bP61025 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cks1bP61025 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cks1bP61025 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Cks1bP61025 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cks1bP61025 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC15.06■□□□□ 0
Cks1bP61025 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cks1bP61025 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cks1bP61025 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.06■□□□□ 0
Cks1bP61025 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cks1bP61025 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cks1bP61025 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Cks1bP61025 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Cks1bP61025 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC15.05■□□□□ 0
Cks1bP61025 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Cks1bP61025 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC15.05■□□□□ -0
Cks1bP61025 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Cks1bP61025 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Cks1bP61025 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cks1bP61025 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Cks1bP61025 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cks1bP61025 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cks1bP61025 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cks1bP61025 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC15.04■□□□□ -0
Cks1bP61025 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Cks1bP61025 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cks1bP61025 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.04■□□□□ -0
Cks1bP61025 Nkain2-201ENSMUST00000092602 558 ntBASIC15.04■□□□□ -0
Cks1bP61025 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cks1bP61025 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Cks1bP61025 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC15.04■□□□□ -0
Cks1bP61025 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cks1bP61025 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cks1bP61025 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cks1bP61025 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC15.03■□□□□ -0
Cks1bP61025 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cks1bP61025 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC15.03■□□□□ -0
Cks1bP61025 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cks1bP61025 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cks1bP61025 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cks1bP61025 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cks1bP61025 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC15.02■□□□□ -0
Cks1bP61025 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
Cks1bP61025 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
Cks1bP61025 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cks1bP61025 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cks1bP61025 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cks1bP61025 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cks1bP61025 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC15.02□□□□□ -0.01
Cks1bP61025 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Cks1bP61025 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Cks1bP61025 Gm26766-202ENSMUST00000227544 2347 ntBASIC15.01□□□□□ -0.01
Cks1bP61025 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cks1bP61025 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cks1bP61025 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cks1bP61025 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cks1bP61025 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Cks1bP61025 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Cks1bP61025 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cks1bP61025 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cks1bP61025 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cks1bP61025 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cks1bP61025 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC15.01□□□□□ -0.01
Cks1bP61025 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cks1bP61025 Gm4430-201ENSMUST00000192413 1943 ntBASIC15□□□□□ -0.01
Cks1bP61025 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
Cks1bP61025 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cks1bP61025 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Cks1bP61025 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cks1bP61025 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC15□□□□□ -0.01
Cks1bP61025 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cks1bP61025 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms