Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
NcanP55066 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC23.3■■□□□ 1.32
NcanP55066 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC23.3■■□□□ 1.32
NcanP55066 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
NcanP55066 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
NcanP55066 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NcanP55066 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
NcanP55066 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
NcanP55066 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
NcanP55066 AC153524.1-201ENSMUST00000220436 1935 ntBASIC23.27■■□□□ 1.32
NcanP55066 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
NcanP55066 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC23.27■■□□□ 1.32
NcanP55066 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC23.27■■□□□ 1.32
NcanP55066 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
NcanP55066 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
NcanP55066 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC23.27■■□□□ 1.32
NcanP55066 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
NcanP55066 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC23.26■■□□□ 1.31
NcanP55066 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
NcanP55066 Gm6139-201ENSMUST00000079261 882 ntBASIC23.26■■□□□ 1.31
NcanP55066 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
NcanP55066 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
NcanP55066 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NcanP55066 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
NcanP55066 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NcanP55066 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC23.25■■□□□ 1.31
NcanP55066 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NcanP55066 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
NcanP55066 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC23.25■■□□□ 1.31
NcanP55066 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
NcanP55066 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC23.25■■□□□ 1.31
NcanP55066 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
NcanP55066 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
NcanP55066 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC23.24■■□□□ 1.31
NcanP55066 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
NcanP55066 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
NcanP55066 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
NcanP55066 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
NcanP55066 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
NcanP55066 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NcanP55066 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
NcanP55066 Gm9207-201ENSMUST00000198773 1115 ntBASIC23.23■■□□□ 1.31
NcanP55066 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
NcanP55066 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NcanP55066 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
NcanP55066 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
NcanP55066 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC23.22■■□□□ 1.31
NcanP55066 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
NcanP55066 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
NcanP55066 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NcanP55066 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
NcanP55066 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
NcanP55066 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
NcanP55066 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC23.22■■□□□ 1.31
NcanP55066 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
NcanP55066 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
NcanP55066 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
NcanP55066 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
NcanP55066 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
NcanP55066 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
NcanP55066 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NcanP55066 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
NcanP55066 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
NcanP55066 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
NcanP55066 Gm7291-201ENSMUST00000199147 382 ntBASIC23.2■■□□□ 1.3
NcanP55066 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NcanP55066 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
NcanP55066 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
NcanP55066 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
NcanP55066 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
NcanP55066 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NcanP55066 Gm22325-201ENSMUST00000158904 308 ntBASIC23.18■■□□□ 1.3
NcanP55066 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.18■■□□□ 1.3
NcanP55066 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
NcanP55066 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
NcanP55066 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NcanP55066 Gm10620-201ENSMUST00000098379 1332 ntBASIC23.17■■□□□ 1.3
NcanP55066 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC23.17■■□□□ 1.3
NcanP55066 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NcanP55066 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
NcanP55066 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
NcanP55066 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.17■■□□□ 1.3
NcanP55066 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
NcanP55066 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
NcanP55066 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
NcanP55066 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC23.16■■□□□ 1.3
NcanP55066 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NcanP55066 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NcanP55066 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
NcanP55066 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NcanP55066 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC23.16■■□□□ 1.3
NcanP55066 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NcanP55066 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
NcanP55066 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
NcanP55066 AC117245.4-201ENSMUST00000217388 1646 ntBASIC23.15■■□□□ 1.3
NcanP55066 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
NcanP55066 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
NcanP55066 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NcanP55066 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
NcanP55066 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 138.1 ms