Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Nub1P54729 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Nub1P54729 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Nub1P54729 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Nub1P54729 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Nub1P54729 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Nub1P54729 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Nub1P54729 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Nub1P54729 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC23.04■■□□□ 1.28
Nub1P54729 Gm17641-201ENSMUST00000166328 2350 ntBASIC23.04■■□□□ 1.28
Nub1P54729 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
Nub1P54729 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC23.04■■□□□ 1.28
Nub1P54729 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Nub1P54729 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Nub1P54729 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Nub1P54729 Nsd1-206ENSMUST00000224918 1001 ntBASIC23.03■■□□□ 1.28
Nub1P54729 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Nub1P54729 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Nub1P54729 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
Nub1P54729 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Nub1P54729 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC23.02■■□□□ 1.28
Nub1P54729 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Nub1P54729 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Nub1P54729 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Nub1P54729 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC23.02■■□□□ 1.28
Nub1P54729 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
Nub1P54729 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Nub1P54729 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Nub1P54729 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Nub1P54729 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC23.01■■□□□ 1.27
Nub1P54729 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC23.01■■□□□ 1.27
Nub1P54729 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Nub1P54729 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Nub1P54729 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Nub1P54729 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Nub1P54729 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC23■■□□□ 1.27
Nub1P54729 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC23■■□□□ 1.27
Nub1P54729 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC23■■□□□ 1.27
Nub1P54729 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC23■■□□□ 1.27
Nub1P54729 Gm5921-201ENSMUST00000075898 882 ntBASIC23■■□□□ 1.27
Nub1P54729 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Nub1P54729 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Nub1P54729 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Nub1P54729 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
Nub1P54729 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC23■■□□□ 1.27
Nub1P54729 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Nub1P54729 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Nub1P54729 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.99■■□□□ 1.27
Nub1P54729 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC22.99■■□□□ 1.27
Nub1P54729 Nsd1-203ENSMUST00000224156 1149 ntBASIC22.99■■□□□ 1.27
Nub1P54729 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Nub1P54729 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC22.98■■□□□ 1.27
Nub1P54729 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Nub1P54729 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Nub1P54729 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Nub1P54729 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Nub1P54729 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Nub1P54729 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC22.98■■□□□ 1.27
Nub1P54729 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Nub1P54729 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Nub1P54729 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Nub1P54729 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC22.98■■□□□ 1.27
Nub1P54729 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Nub1P54729 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC22.97■■□□□ 1.27
Nub1P54729 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Nub1P54729 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Nub1P54729 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
Nub1P54729 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC22.97■■□□□ 1.27
Nub1P54729 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Nub1P54729 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC22.97■■□□□ 1.27
Nub1P54729 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
Nub1P54729 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC22.96■■□□□ 1.27
Nub1P54729 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Nub1P54729 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Nub1P54729 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
Nub1P54729 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC22.96■■□□□ 1.27
Nub1P54729 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Nub1P54729 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Nub1P54729 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.27
Nub1P54729 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Nub1P54729 Gm13238-201ENSMUST00000117655 780 ntBASIC22.95■■□□□ 1.26
Nub1P54729 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC22.95■■□□□ 1.26
Nub1P54729 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
Nub1P54729 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC22.95■■□□□ 1.26
Nub1P54729 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Nub1P54729 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Nub1P54729 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC22.95■■□□□ 1.26
Nub1P54729 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Nub1P54729 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Nub1P54729 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC22.94■■□□□ 1.26
Nub1P54729 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Nub1P54729 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
Nub1P54729 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Nub1P54729 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Nub1P54729 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Nub1P54729 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC22.93■■□□□ 1.26
Nub1P54729 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC22.93■■□□□ 1.26
Nub1P54729 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Nub1P54729 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC22.92■■□□□ 1.26
Nub1P54729 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms