Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smim1P0C8K7 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Smim1P0C8K7 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smim1P0C8K7 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Smim1P0C8K7 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smim1P0C8K7 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smim1P0C8K7 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smim1P0C8K7 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Smim1P0C8K7 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smim1P0C8K7 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Smim1P0C8K7 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Smim1P0C8K7 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smim1P0C8K7 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smim1P0C8K7 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smim1P0C8K7 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Smim1P0C8K7 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smim1P0C8K7 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smim1P0C8K7 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Smim1P0C8K7 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Smim1P0C8K7 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smim1P0C8K7 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smim1P0C8K7 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smim1P0C8K7 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Smim1P0C8K7 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Smim1P0C8K7 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC14.82□□□□□ -0.04
Smim1P0C8K7 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Smim1P0C8K7 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Smim1P0C8K7 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smim1P0C8K7 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC14.81□□□□□ -0.04
Smim1P0C8K7 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smim1P0C8K7 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Smim1P0C8K7 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Smim1P0C8K7 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Smim1P0C8K7 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smim1P0C8K7 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Smim1P0C8K7 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smim1P0C8K7 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smim1P0C8K7 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smim1P0C8K7 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smim1P0C8K7 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Smim1P0C8K7 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smim1P0C8K7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smim1P0C8K7 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Smim1P0C8K7 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smim1P0C8K7 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Smim1P0C8K7 Kdm3b-204ENSMUST00000224715 2032 ntBASIC14.8□□□□□ -0.04
Smim1P0C8K7 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Smim1P0C8K7 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smim1P0C8K7 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smim1P0C8K7 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smim1P0C8K7 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Smim1P0C8K7 Gm5112-201ENSMUST00000204407 2368 ntBASIC14.78□□□□□ -0.04
Smim1P0C8K7 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smim1P0C8K7 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smim1P0C8K7 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Smim1P0C8K7 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smim1P0C8K7 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smim1P0C8K7 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Smim1P0C8K7 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC14.77□□□□□ -0.04
Smim1P0C8K7 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Smim1P0C8K7 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Smim1P0C8K7 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smim1P0C8K7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smim1P0C8K7 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Smim1P0C8K7 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smim1P0C8K7 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smim1P0C8K7 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smim1P0C8K7 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smim1P0C8K7 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smim1P0C8K7 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Smim1P0C8K7 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smim1P0C8K7 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Smim1P0C8K7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smim1P0C8K7 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Smim1P0C8K7 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC14.76□□□□□ -0.05
Smim1P0C8K7 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Smim1P0C8K7 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smim1P0C8K7 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Smim1P0C8K7 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smim1P0C8K7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smim1P0C8K7 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Smim1P0C8K7 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Smim1P0C8K7 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
Smim1P0C8K7 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC14.75□□□□□ -0.05
Smim1P0C8K7 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smim1P0C8K7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Smim1P0C8K7 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smim1P0C8K7 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Smim1P0C8K7 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC14.74□□□□□ -0.05
Smim1P0C8K7 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smim1P0C8K7 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smim1P0C8K7 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smim1P0C8K7 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smim1P0C8K7 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Smim1P0C8K7 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Smim1P0C8K7 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Smim1P0C8K7 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smim1P0C8K7 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Smim1P0C8K7 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smim1P0C8K7 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms