Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.23■□□□□ 0.83
Tnfrsf17O88472 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfrsf17O88472 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.23■□□□□ 0.83
Tnfrsf17O88472 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfrsf17O88472 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.23■□□□□ 0.83
Tnfrsf17O88472 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfrsf17O88472 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfrsf17O88472 Gm5874-201ENSMUST00000096101 508 ntBASIC20.23■□□□□ 0.83
Tnfrsf17O88472 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Tnfrsf17O88472 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tnfrsf17O88472 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Tnfrsf17O88472 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfrsf17O88472 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfrsf17O88472 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfrsf17O88472 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfrsf17O88472 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfrsf17O88472 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Tnfrsf17O88472 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.21■□□□□ 0.83
Tnfrsf17O88472 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Tnfrsf17O88472 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
Tnfrsf17O88472 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfrsf17O88472 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfrsf17O88472 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Tnfrsf17O88472 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfrsf17O88472 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfrsf17O88472 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
Tnfrsf17O88472 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC20.18■□□□□ 0.82
Tnfrsf17O88472 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfrsf17O88472 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
Tnfrsf17O88472 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC20.18■□□□□ 0.82
Tnfrsf17O88472 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Tnfrsf17O88472 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfrsf17O88472 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.18■□□□□ 0.82
Tnfrsf17O88472 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfrsf17O88472 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Tnfrsf17O88472 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnfrsf17O88472 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnfrsf17O88472 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Tnfrsf17O88472 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnfrsf17O88472 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Tnfrsf17O88472 Gm7291-201ENSMUST00000199147 382 ntBASIC20.17■□□□□ 0.82
Tnfrsf17O88472 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnfrsf17O88472 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Tnfrsf17O88472 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Tnfrsf17O88472 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.16■□□□□ 0.82
Tnfrsf17O88472 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.16■□□□□ 0.82
Tnfrsf17O88472 Gm43017-201ENSMUST00000198296 752 ntBASIC20.16■□□□□ 0.82
Tnfrsf17O88472 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Tnfrsf17O88472 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfrsf17O88472 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfrsf17O88472 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfrsf17O88472 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.15■□□□□ 0.82
Tnfrsf17O88472 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfrsf17O88472 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.15■□□□□ 0.82
Tnfrsf17O88472 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Tnfrsf17O88472 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.14■□□□□ 0.81
Tnfrsf17O88472 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.14■□□□□ 0.81
Tnfrsf17O88472 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tnfrsf17O88472 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Tnfrsf17O88472 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Tnfrsf17O88472 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Tnfrsf17O88472 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnfrsf17O88472 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Tnfrsf17O88472 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.13■□□□□ 0.81
Tnfrsf17O88472 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Tnfrsf17O88472 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Tnfrsf17O88472 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.13■□□□□ 0.81
Tnfrsf17O88472 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnfrsf17O88472 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tnfrsf17O88472 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Tnfrsf17O88472 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tnfrsf17O88472 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Tnfrsf17O88472 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Tnfrsf17O88472 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tnfrsf17O88472 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tnfrsf17O88472 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.11■□□□□ 0.81
Tnfrsf17O88472 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tnfrsf17O88472 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tnfrsf17O88472 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.11■□□□□ 0.81
Tnfrsf17O88472 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Tnfrsf17O88472 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tnfrsf17O88472 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Tnfrsf17O88472 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Tnfrsf17O88472 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tnfrsf17O88472 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Tnfrsf17O88472 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tnfrsf17O88472 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Tnfrsf17O88472 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tnfrsf17O88472 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tnfrsf17O88472 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.09■□□□□ 0.81
Tnfrsf17O88472 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tnfrsf17O88472 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.09■□□□□ 0.81
Tnfrsf17O88472 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tnfrsf17O88472 Mir7075-201ENSMUST00000184187 82 ntBASIC20.09■□□□□ 0.81
Tnfrsf17O88472 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tnfrsf17O88472 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tnfrsf17O88472 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tnfrsf17O88472 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tnfrsf17O88472 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tnfrsf17O88472 Gm43137-201ENSMUST00000198052 594 ntBASIC20.08■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms