Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vti1bO88384 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.31■□□□□ 0.84
Vti1bO88384 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Vti1bO88384 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vti1bO88384 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vti1bO88384 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vti1bO88384 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Vti1bO88384 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Vti1bO88384 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.3■□□□□ 0.84
Vti1bO88384 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vti1bO88384 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Vti1bO88384 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Vti1bO88384 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.29■□□□□ 0.84
Vti1bO88384 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Vti1bO88384 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Vti1bO88384 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vti1bO88384 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vti1bO88384 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vti1bO88384 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vti1bO88384 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vti1bO88384 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vti1bO88384 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Vti1bO88384 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vti1bO88384 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vti1bO88384 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Vti1bO88384 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
Vti1bO88384 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.27■□□□□ 0.84
Vti1bO88384 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Vti1bO88384 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Vti1bO88384 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
Vti1bO88384 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Vti1bO88384 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Vti1bO88384 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Vti1bO88384 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vti1bO88384 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vti1bO88384 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.26■□□□□ 0.83
Vti1bO88384 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Vti1bO88384 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vti1bO88384 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vti1bO88384 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Vti1bO88384 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vti1bO88384 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.25■□□□□ 0.83
Vti1bO88384 Gm27502-201ENSMUST00000183495 199 ntBASIC20.25■□□□□ 0.83
Vti1bO88384 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vti1bO88384 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vti1bO88384 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Vti1bO88384 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vti1bO88384 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vti1bO88384 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Vti1bO88384 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vti1bO88384 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Vti1bO88384 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vti1bO88384 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vti1bO88384 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Vti1bO88384 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Vti1bO88384 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vti1bO88384 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vti1bO88384 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vti1bO88384 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Vti1bO88384 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Vti1bO88384 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vti1bO88384 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Vti1bO88384 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Vti1bO88384 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vti1bO88384 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vti1bO88384 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vti1bO88384 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Vti1bO88384 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Vti1bO88384 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC20.21■□□□□ 0.83
Vti1bO88384 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.21■□□□□ 0.83
Vti1bO88384 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.21■□□□□ 0.83
Vti1bO88384 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Vti1bO88384 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vti1bO88384 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vti1bO88384 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Vti1bO88384 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
Vti1bO88384 Gm14523-201ENSMUST00000117260 558 ntBASIC20.2■□□□□ 0.82
Vti1bO88384 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.2■□□□□ 0.82
Vti1bO88384 Gm12366-201ENSMUST00000121722 873 ntBASIC20.2■□□□□ 0.82
Vti1bO88384 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.2■□□□□ 0.82
Vti1bO88384 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.2■□□□□ 0.82
Vti1bO88384 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.2■□□□□ 0.82
Vti1bO88384 Gm5786-201ENSMUST00000085368 882 ntBASIC20.2■□□□□ 0.82
Vti1bO88384 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Vti1bO88384 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Vti1bO88384 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
Vti1bO88384 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vti1bO88384 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Vti1bO88384 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vti1bO88384 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vti1bO88384 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Vti1bO88384 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Vti1bO88384 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Vti1bO88384 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.19■□□□□ 0.82
Vti1bO88384 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vti1bO88384 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Vti1bO88384 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Vti1bO88384 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.19■□□□□ 0.82
Vti1bO88384 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Vti1bO88384 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms