Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lnp1A0A1B0GSK3 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lnp1A0A1B0GSK3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lnp1A0A1B0GSK3 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lnp1A0A1B0GSK3 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lnp1A0A1B0GSK3 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Lnp1A0A1B0GSK3 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Lnp1A0A1B0GSK3 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.83■□□□□ 0.44
Lnp1A0A1B0GSK3 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Lnp1A0A1B0GSK3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lnp1A0A1B0GSK3 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lnp1A0A1B0GSK3 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.83■□□□□ 0.44
Lnp1A0A1B0GSK3 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Lnp1A0A1B0GSK3 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC17.82■□□□□ 0.44
Lnp1A0A1B0GSK3 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lnp1A0A1B0GSK3 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Lnp1A0A1B0GSK3 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lnp1A0A1B0GSK3 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Lnp1A0A1B0GSK3 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lnp1A0A1B0GSK3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
Lnp1A0A1B0GSK3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.82■□□□□ 0.44
Lnp1A0A1B0GSK3 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lnp1A0A1B0GSK3 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.82■□□□□ 0.44
Lnp1A0A1B0GSK3 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Lnp1A0A1B0GSK3 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.82■□□□□ 0.44
Lnp1A0A1B0GSK3 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Lnp1A0A1B0GSK3 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Lnp1A0A1B0GSK3 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lnp1A0A1B0GSK3 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Lnp1A0A1B0GSK3 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lnp1A0A1B0GSK3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lnp1A0A1B0GSK3 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lnp1A0A1B0GSK3 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Lnp1A0A1B0GSK3 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lnp1A0A1B0GSK3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Lnp1A0A1B0GSK3 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.81■□□□□ 0.44
Lnp1A0A1B0GSK3 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.81■□□□□ 0.44
Lnp1A0A1B0GSK3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lnp1A0A1B0GSK3 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lnp1A0A1B0GSK3 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lnp1A0A1B0GSK3 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.8■□□□□ 0.44
Lnp1A0A1B0GSK3 Gm10420-201ENSMUST00000121713 882 ntBASIC17.8■□□□□ 0.44
Lnp1A0A1B0GSK3 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lnp1A0A1B0GSK3 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Lnp1A0A1B0GSK3 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lnp1A0A1B0GSK3 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lnp1A0A1B0GSK3 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Lnp1A0A1B0GSK3 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lnp1A0A1B0GSK3 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Lnp1A0A1B0GSK3 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.8■□□□□ 0.44
Lnp1A0A1B0GSK3 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lnp1A0A1B0GSK3 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lnp1A0A1B0GSK3 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lnp1A0A1B0GSK3 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.79■□□□□ 0.44
Lnp1A0A1B0GSK3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Lnp1A0A1B0GSK3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Lnp1A0A1B0GSK3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lnp1A0A1B0GSK3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lnp1A0A1B0GSK3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
Lnp1A0A1B0GSK3 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Lnp1A0A1B0GSK3 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lnp1A0A1B0GSK3 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lnp1A0A1B0GSK3 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Lnp1A0A1B0GSK3 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lnp1A0A1B0GSK3 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lnp1A0A1B0GSK3 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Lnp1A0A1B0GSK3 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lnp1A0A1B0GSK3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lnp1A0A1B0GSK3 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lnp1A0A1B0GSK3 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lnp1A0A1B0GSK3 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.77■□□□□ 0.44
Lnp1A0A1B0GSK3 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.77■□□□□ 0.44
Lnp1A0A1B0GSK3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Lnp1A0A1B0GSK3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Lnp1A0A1B0GSK3 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.77■□□□□ 0.44
Lnp1A0A1B0GSK3 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Lnp1A0A1B0GSK3 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Lnp1A0A1B0GSK3 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.76■□□□□ 0.43
Lnp1A0A1B0GSK3 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lnp1A0A1B0GSK3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Lnp1A0A1B0GSK3 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Lnp1A0A1B0GSK3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Lnp1A0A1B0GSK3 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lnp1A0A1B0GSK3 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lnp1A0A1B0GSK3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Lnp1A0A1B0GSK3 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lnp1A0A1B0GSK3 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Lnp1A0A1B0GSK3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lnp1A0A1B0GSK3 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lnp1A0A1B0GSK3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Lnp1A0A1B0GSK3 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lnp1A0A1B0GSK3 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Lnp1A0A1B0GSK3 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Lnp1A0A1B0GSK3 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lnp1A0A1B0GSK3 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.74■□□□□ 0.43
Lnp1A0A1B0GSK3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC17.74■□□□□ 0.43
Lnp1A0A1B0GSK3 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lnp1A0A1B0GSK3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lnp1A0A1B0GSK3 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Lnp1A0A1B0GSK3 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms