Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Igkv1-88A0A140T8N1 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Igkv1-88A0A140T8N1 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC14.07□□□□□ -0.16
Igkv1-88A0A140T8N1 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.07□□□□□ -0.16
Igkv1-88A0A140T8N1 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Igkv1-88A0A140T8N1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Igkv1-88A0A140T8N1 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Igkv1-88A0A140T8N1 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Igkv1-88A0A140T8N1 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC14.07□□□□□ -0.16
Igkv1-88A0A140T8N1 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Igkv1-88A0A140T8N1 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Igkv1-88A0A140T8N1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Igkv1-88A0A140T8N1 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Igkv1-88A0A140T8N1 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Igkv1-88A0A140T8N1 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Igkv1-88A0A140T8N1 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Igkv1-88A0A140T8N1 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Igkv1-88A0A140T8N1 Mir3960-201ENSMUST00000198213 73 ntBASIC14.06□□□□□ -0.16
Igkv1-88A0A140T8N1 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Igkv1-88A0A140T8N1 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Igkv1-88A0A140T8N1 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Igkv1-88A0A140T8N1 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Igkv1-88A0A140T8N1 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Igkv1-88A0A140T8N1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Igkv1-88A0A140T8N1 Gm28731-201ENSMUST00000185564 1569 ntBASIC14.05□□□□□ -0.16
Igkv1-88A0A140T8N1 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Igkv1-88A0A140T8N1 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Igkv1-88A0A140T8N1 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Igkv1-88A0A140T8N1 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC14.05□□□□□ -0.16
Igkv1-88A0A140T8N1 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Igkv1-88A0A140T8N1 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC14.05□□□□□ -0.16
Igkv1-88A0A140T8N1 AC153911.1-201ENSMUST00000220378 758 ntBASIC14.05□□□□□ -0.16
Igkv1-88A0A140T8N1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Igkv1-88A0A140T8N1 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Igkv1-88A0A140T8N1 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Igkv1-88A0A140T8N1 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Igkv1-88A0A140T8N1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC14.05□□□□□ -0.16
Igkv1-88A0A140T8N1 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Igkv1-88A0A140T8N1 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Igkv1-88A0A140T8N1 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Igkv1-88A0A140T8N1 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Igkv1-88A0A140T8N1 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Igkv1-88A0A140T8N1 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Igkv1-88A0A140T8N1 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Igkv1-88A0A140T8N1 Gm13042-201ENSMUST00000119244 1955 ntBASIC14.04□□□□□ -0.16
Igkv1-88A0A140T8N1 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Igkv1-88A0A140T8N1 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Igkv1-88A0A140T8N1 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Igkv1-88A0A140T8N1 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Igkv1-88A0A140T8N1 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC14.04□□□□□ -0.16
Igkv1-88A0A140T8N1 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Igkv1-88A0A140T8N1 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Igkv1-88A0A140T8N1 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Igkv1-88A0A140T8N1 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Igkv1-88A0A140T8N1 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC14.03□□□□□ -0.16
Igkv1-88A0A140T8N1 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC14.03□□□□□ -0.16
Igkv1-88A0A140T8N1 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Igkv1-88A0A140T8N1 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Igkv1-88A0A140T8N1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Igkv1-88A0A140T8N1 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Igkv1-88A0A140T8N1 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC14.03□□□□□ -0.16
Igkv1-88A0A140T8N1 AC122317.2-201ENSMUST00000218708 1248 ntBASIC14.03□□□□□ -0.16
Igkv1-88A0A140T8N1 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Igkv1-88A0A140T8N1 Gm9812-201ENSMUST00000061934 968 ntBASIC14.03□□□□□ -0.16
Igkv1-88A0A140T8N1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Igkv1-88A0A140T8N1 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC14.03□□□□□ -0.16
Igkv1-88A0A140T8N1 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Igkv1-88A0A140T8N1 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Igkv1-88A0A140T8N1 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Igkv1-88A0A140T8N1 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Igkv1-88A0A140T8N1 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Igkv1-88A0A140T8N1 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Igkv1-88A0A140T8N1 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Igkv1-88A0A140T8N1 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Igkv1-88A0A140T8N1 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Igkv1-88A0A140T8N1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Igkv1-88A0A140T8N1 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Igkv1-88A0A140T8N1 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Igkv1-88A0A140T8N1 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC14.02□□□□□ -0.16
Igkv1-88A0A140T8N1 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Igkv1-88A0A140T8N1 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Igkv1-88A0A140T8N1 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Igkv1-88A0A140T8N1 Terc-201ENSMUST00000082862 423 ntBASIC14.02□□□□□ -0.17
Igkv1-88A0A140T8N1 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Igkv1-88A0A140T8N1 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Igkv1-88A0A140T8N1 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Igkv1-88A0A140T8N1 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Igkv1-88A0A140T8N1 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Igkv1-88A0A140T8N1 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Igkv1-88A0A140T8N1 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC14.01□□□□□ -0.17
Igkv1-88A0A140T8N1 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Igkv1-88A0A140T8N1 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Igkv1-88A0A140T8N1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Igkv1-88A0A140T8N1 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Igkv1-88A0A140T8N1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Igkv1-88A0A140T8N1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Igkv1-88A0A140T8N1 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC14.01□□□□□ -0.17
Igkv1-88A0A140T8N1 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Igkv1-88A0A140T8N1 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC14□□□□□ -0.17
Igkv1-88A0A140T8N1 Gm12818-201ENSMUST00000117562 1349 ntBASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms