Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Igkv8-28A0A0G2JE47 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Igkv8-28A0A0G2JE47 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC13.41□□□□□ -0.26
Igkv8-28A0A0G2JE47 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Igkv8-28A0A0G2JE47 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Igkv8-28A0A0G2JE47 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Igkv8-28A0A0G2JE47 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Igkv8-28A0A0G2JE47 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Igkv8-28A0A0G2JE47 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Igkv8-28A0A0G2JE47 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Igkv8-28A0A0G2JE47 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Igkv8-28A0A0G2JE47 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Igkv8-28A0A0G2JE47 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Igkv8-28A0A0G2JE47 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Igkv8-28A0A0G2JE47 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Igkv8-28A0A0G2JE47 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Igkv8-28A0A0G2JE47 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC13.4□□□□□ -0.26
Igkv8-28A0A0G2JE47 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC13.39□□□□□ -0.27
Igkv8-28A0A0G2JE47 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Igkv8-28A0A0G2JE47 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Igkv8-28A0A0G2JE47 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Igkv8-28A0A0G2JE47 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Igkv8-28A0A0G2JE47 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Igkv8-28A0A0G2JE47 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Igkv8-28A0A0G2JE47 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC13.39□□□□□ -0.27
Igkv8-28A0A0G2JE47 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Igkv8-28A0A0G2JE47 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC13.38□□□□□ -0.27
Igkv8-28A0A0G2JE47 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Igkv8-28A0A0G2JE47 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC13.38□□□□□ -0.27
Igkv8-28A0A0G2JE47 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Igkv8-28A0A0G2JE47 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Igkv8-28A0A0G2JE47 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Igkv8-28A0A0G2JE47 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Igkv8-28A0A0G2JE47 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Igkv8-28A0A0G2JE47 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Igkv8-28A0A0G2JE47 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Igkv8-28A0A0G2JE47 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Igkv8-28A0A0G2JE47 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Igkv8-28A0A0G2JE47 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Igkv8-28A0A0G2JE47 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC13.38□□□□□ -0.27
Igkv8-28A0A0G2JE47 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC13.38□□□□□ -0.27
Igkv8-28A0A0G2JE47 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Igkv8-28A0A0G2JE47 AC115037.1-201ENSMUST00000223391 2173 ntBASIC13.38□□□□□ -0.27
Igkv8-28A0A0G2JE47 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Igkv8-28A0A0G2JE47 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Igkv8-28A0A0G2JE47 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Igkv8-28A0A0G2JE47 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC13.37□□□□□ -0.27
Igkv8-28A0A0G2JE47 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Igkv8-28A0A0G2JE47 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Igkv8-28A0A0G2JE47 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Igkv8-28A0A0G2JE47 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC13.37□□□□□ -0.27
Igkv8-28A0A0G2JE47 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Igkv8-28A0A0G2JE47 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Igkv8-28A0A0G2JE47 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Igkv8-28A0A0G2JE47 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Igkv8-28A0A0G2JE47 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC13.37□□□□□ -0.27
Igkv8-28A0A0G2JE47 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Igkv8-28A0A0G2JE47 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Igkv8-28A0A0G2JE47 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Igkv8-28A0A0G2JE47 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Igkv8-28A0A0G2JE47 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Igkv8-28A0A0G2JE47 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Igkv8-28A0A0G2JE47 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Igkv8-28A0A0G2JE47 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Igkv8-28A0A0G2JE47 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Igkv8-28A0A0G2JE47 Gm28731-201ENSMUST00000185564 1569 ntBASIC13.36□□□□□ -0.27
Igkv8-28A0A0G2JE47 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Igkv8-28A0A0G2JE47 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Igkv8-28A0A0G2JE47 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Igkv8-28A0A0G2JE47 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Igkv8-28A0A0G2JE47 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Igkv8-28A0A0G2JE47 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC13.35□□□□□ -0.27
Igkv8-28A0A0G2JE47 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Igkv8-28A0A0G2JE47 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Igkv8-28A0A0G2JE47 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Igkv8-28A0A0G2JE47 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Igkv8-28A0A0G2JE47 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Igkv8-28A0A0G2JE47 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Igkv8-28A0A0G2JE47 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Igkv8-28A0A0G2JE47 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Igkv8-28A0A0G2JE47 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Igkv8-28A0A0G2JE47 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC13.34□□□□□ -0.27
Igkv8-28A0A0G2JE47 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Igkv8-28A0A0G2JE47 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Igkv8-28A0A0G2JE47 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Igkv8-28A0A0G2JE47 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC13.34□□□□□ -0.27
Igkv8-28A0A0G2JE47 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Igkv8-28A0A0G2JE47 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC13.34□□□□□ -0.27
Igkv8-28A0A0G2JE47 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Igkv8-28A0A0G2JE47 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Igkv8-28A0A0G2JE47 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.27
Igkv8-28A0A0G2JE47 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Igkv8-28A0A0G2JE47 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Igkv8-28A0A0G2JE47 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Igkv8-28A0A0G2JE47 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Igkv8-28A0A0G2JE47 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Igkv8-28A0A0G2JE47 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Igkv8-28A0A0G2JE47 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Igkv8-28A0A0G2JE47 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Igkv8-28A0A0G2JE47 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms