Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC15.32■□□□□ 0.04
Trav8-1A0A075B641 AC153524.1-201ENSMUST00000220436 1935 ntBASIC15.32■□□□□ 0.04
Trav8-1A0A075B641 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8-1A0A075B641 Gm37415-201ENSMUST00000192265 2054 ntBASIC15.32■□□□□ 0.04
Trav8-1A0A075B641 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8-1A0A075B641 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav8-1A0A075B641 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC15.31■□□□□ 0.04
Trav8-1A0A075B641 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav8-1A0A075B641 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav8-1A0A075B641 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trav8-1A0A075B641 AC153962.1-201ENSMUST00000218530 1948 ntBASIC15.31■□□□□ 0.04
Trav8-1A0A075B641 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav8-1A0A075B641 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav8-1A0A075B641 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Trav8-1A0A075B641 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trav8-1A0A075B641 Gm4419-202ENSMUST00000226239 1431 ntBASIC15.3■□□□□ 0.04
Trav8-1A0A075B641 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav8-1A0A075B641 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav8-1A0A075B641 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Trav8-1A0A075B641 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav8-1A0A075B641 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8-1A0A075B641 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8-1A0A075B641 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8-1A0A075B641 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
Trav8-1A0A075B641 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8-1A0A075B641 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8-1A0A075B641 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8-1A0A075B641 Gm24970-201ENSMUST00000175582 82 ntBASIC15.29■□□□□ 0.04
Trav8-1A0A075B641 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav8-1A0A075B641 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8-1A0A075B641 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Trav8-1A0A075B641 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav8-1A0A075B641 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8-1A0A075B641 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8-1A0A075B641 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8-1A0A075B641 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8-1A0A075B641 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8-1A0A075B641 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav8-1A0A075B641 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8-1A0A075B641 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8-1A0A075B641 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav8-1A0A075B641 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trav8-1A0A075B641 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav8-1A0A075B641 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC15.27■□□□□ 0.04
Trav8-1A0A075B641 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav8-1A0A075B641 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Trav8-1A0A075B641 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.04
Trav8-1A0A075B641 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav8-1A0A075B641 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC15.27■□□□□ 0.04
Trav8-1A0A075B641 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav8-1A0A075B641 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav8-1A0A075B641 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Trav8-1A0A075B641 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8-1A0A075B641 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8-1A0A075B641 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8-1A0A075B641 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8-1A0A075B641 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8-1A0A075B641 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8-1A0A075B641 Gm9397-201ENSMUST00000200125 605 ntBASIC15.26■□□□□ 0.03
Trav8-1A0A075B641 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
Trav8-1A0A075B641 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8-1A0A075B641 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
Trav8-1A0A075B641 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Trav8-1A0A075B641 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav8-1A0A075B641 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8-1A0A075B641 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8-1A0A075B641 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8-1A0A075B641 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8-1A0A075B641 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trav8-1A0A075B641 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8-1A0A075B641 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8-1A0A075B641 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8-1A0A075B641 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav8-1A0A075B641 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trav8-1A0A075B641 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trav8-1A0A075B641 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8-1A0A075B641 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8-1A0A075B641 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav8-1A0A075B641 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8-1A0A075B641 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8-1A0A075B641 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8-1A0A075B641 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8-1A0A075B641 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8-1A0A075B641 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8-1A0A075B641 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trav8-1A0A075B641 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Trav8-1A0A075B641 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8-1A0A075B641 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav8-1A0A075B641 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC15.23■□□□□ 0.03
Trav8-1A0A075B641 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
Trav8-1A0A075B641 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.22■□□□□ 0.03
Trav8-1A0A075B641 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trav8-1A0A075B641 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC15.22■□□□□ 0.03
Trav8-1A0A075B641 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav8-1A0A075B641 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Trav8-1A0A075B641 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trav8-1A0A075B641 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav8-1A0A075B641 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav8-1A0A075B641 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trav8-1A0A075B641 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms