Protein–RNA interactions for Protein: W4VSP1

Speer3, MCG129800, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Speer3W4VSP1 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Speer3W4VSP1 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Speer3W4VSP1 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Speer3W4VSP1 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.82□□□□□ -0.2
Speer3W4VSP1 Gm8872-201ENSMUST00000197475 1341 ntBASIC13.82□□□□□ -0.2
Speer3W4VSP1 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Speer3W4VSP1 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Speer3W4VSP1 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Speer3W4VSP1 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Speer3W4VSP1 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Speer3W4VSP1 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Speer3W4VSP1 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Speer3W4VSP1 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Speer3W4VSP1 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Speer3W4VSP1 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Speer3W4VSP1 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.82□□□□□ -0.2
Speer3W4VSP1 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.82□□□□□ -0.2
Speer3W4VSP1 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Speer3W4VSP1 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Gm25025-201ENSMUST00000175018 111 ntBASIC13.81□□□□□ -0.2
Speer3W4VSP1 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.81□□□□□ -0.2
Speer3W4VSP1 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Gm5779-201ENSMUST00000218467 910 ntBASIC13.81□□□□□ -0.2
Speer3W4VSP1 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.81□□□□□ -0.2
Speer3W4VSP1 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.81□□□□□ -0.2
Speer3W4VSP1 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Speer3W4VSP1 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Speer3W4VSP1 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Speer3W4VSP1 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Speer3W4VSP1 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.8□□□□□ -0.2
Speer3W4VSP1 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Speer3W4VSP1 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Speer3W4VSP1 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.8□□□□□ -0.2
Speer3W4VSP1 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Speer3W4VSP1 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Speer3W4VSP1 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Speer3W4VSP1 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Speer3W4VSP1 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Speer3W4VSP1 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Speer3W4VSP1 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Speer3W4VSP1 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Speer3W4VSP1 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Speer3W4VSP1 Gm12882-201ENSMUST00000121696 517 ntBASIC13.8□□□□□ -0.2
Speer3W4VSP1 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.8□□□□□ -0.2
Speer3W4VSP1 AA543401-201ENSMUST00000164248 1269 ntBASIC13.8□□□□□ -0.2
Speer3W4VSP1 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Speer3W4VSP1 Fam240b-201ENSMUST00000180282 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Speer3W4VSP1 Gm27231-201ENSMUST00000185191 551 ntTSL 5 BASIC13.8□□□□□ -0.2
Speer3W4VSP1 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC13.8□□□□□ -0.2
Speer3W4VSP1 Gm5708-201ENSMUST00000196289 886 ntBASIC13.8□□□□□ -0.2
Speer3W4VSP1 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.8□□□□□ -0.2
Speer3W4VSP1 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Speer3W4VSP1 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Speer3W4VSP1 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Speer3W4VSP1 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Speer3W4VSP1 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Speer3W4VSP1 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.8□□□□□ -0.2
Speer3W4VSP1 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Speer3W4VSP1 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Speer3W4VSP1 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Speer3W4VSP1 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms