Protein–RNA interactions for Protein: S4R2D1

Gm5493, Predicted gene 5493, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5493S4R2D1 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.38□□□□□ -0.59
Gm5493S4R2D1 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 Gm27301-201ENSMUST00000184012 127 ntBASIC11.38□□□□□ -0.59
Gm5493S4R2D1 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC11.38□□□□□ -0.59
Gm5493S4R2D1 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.37□□□□□ -0.59
Gm5493S4R2D1 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.37□□□□□ -0.59
Gm5493S4R2D1 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Gm5493S4R2D1 Gm11873-201ENSMUST00000117877 1304 ntBASIC11.37□□□□□ -0.59
Gm5493S4R2D1 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm5493S4R2D1 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm5493S4R2D1 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm5493S4R2D1 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.37□□□□□ -0.59
Gm5493S4R2D1 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Gm5493S4R2D1 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Gm5493S4R2D1 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm5493S4R2D1 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm5493S4R2D1 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.37□□□□□ -0.59
Gm5493S4R2D1 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.37□□□□□ -0.59
Gm5493S4R2D1 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm5493S4R2D1 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Gm5493S4R2D1 Gm13036-201ENSMUST00000117799 748 ntBASIC11.37□□□□□ -0.59
Gm5493S4R2D1 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm5493S4R2D1 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC11.37□□□□□ -0.59
Gm5493S4R2D1 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.37□□□□□ -0.59
Gm5493S4R2D1 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC11.37□□□□□ -0.59
Gm5493S4R2D1 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm5493S4R2D1 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm5493S4R2D1 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm5493S4R2D1 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Gm5493S4R2D1 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm5493S4R2D1 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm5493S4R2D1 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm5493S4R2D1 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Gm5493S4R2D1 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm5493S4R2D1 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Gm5493S4R2D1 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm5493S4R2D1 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm5493S4R2D1 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm5493S4R2D1 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Gm5493S4R2D1 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm5493S4R2D1 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm5493S4R2D1 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm5493S4R2D1 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm5493S4R2D1 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Gm5493S4R2D1 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm5493S4R2D1 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC11.37□□□□□ -0.59
Gm5493S4R2D1 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.37□□□□□ -0.59
Gm5493S4R2D1 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Gm5493S4R2D1 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC11.36□□□□□ -0.59
Gm5493S4R2D1 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.36□□□□□ -0.59
Gm5493S4R2D1 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm5493S4R2D1 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm5493S4R2D1 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm5493S4R2D1 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm5493S4R2D1 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Gm5493S4R2D1 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.36□□□□□ -0.59
Gm5493S4R2D1 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Gm5493S4R2D1 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm5493S4R2D1 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Gm5493S4R2D1 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Gm5493S4R2D1 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms