Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Gm24420-201ENSMUST00000176676 59 ntBASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Gm3436-201ENSMUST00000179930 840 ntBASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Gm10766-202ENSMUST00000194123 606 ntBASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
H2afb3S4R1G7 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
H2afb3S4R1G7 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Gm5320-201ENSMUST00000207163 1519 ntBASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Gm37105-201ENSMUST00000192251 2085 ntBASIC12.11□□□□□ -0.47
H2afb3S4R1G7 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms