Protein–RNA interactions for Protein: Q9Z0S4

Cldn13, Claudin-13, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn13Q9Z0S4 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.03□□□□□ -0.48
Cldn13Q9Z0S4 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cldn13Q9Z0S4 Gm8927-201ENSMUST00000181978 981 ntBASIC12.03□□□□□ -0.48
Cldn13Q9Z0S4 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.03□□□□□ -0.48
Cldn13Q9Z0S4 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.03□□□□□ -0.48
Cldn13Q9Z0S4 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cldn13Q9Z0S4 Arhgef33-209ENSMUST00000225223 714 ntBASIC12.03□□□□□ -0.48
Cldn13Q9Z0S4 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cldn13Q9Z0S4 Gm3222-201ENSMUST00000071282 990 ntBASIC12.03□□□□□ -0.48
Cldn13Q9Z0S4 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cldn13Q9Z0S4 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Cldn13Q9Z0S4 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cldn13Q9Z0S4 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cldn13Q9Z0S4 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cldn13Q9Z0S4 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.03□□□□□ -0.48
Cldn13Q9Z0S4 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cldn13Q9Z0S4 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cldn13Q9Z0S4 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cldn13Q9Z0S4 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cldn13Q9Z0S4 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.03□□□□□ -0.48
Cldn13Q9Z0S4 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cldn13Q9Z0S4 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Cldn13Q9Z0S4 Rubie-203ENSMUST00000227803 2430 ntBASIC12.02□□□□□ -0.48
Cldn13Q9Z0S4 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cldn13Q9Z0S4 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Cldn13Q9Z0S4 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cldn13Q9Z0S4 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cldn13Q9Z0S4 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cldn13Q9Z0S4 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Cldn13Q9Z0S4 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cldn13Q9Z0S4 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Cldn13Q9Z0S4 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cldn13Q9Z0S4 Mir698-201ENSMUST00000102164 109 ntBASIC12.02□□□□□ -0.49
Cldn13Q9Z0S4 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Cldn13Q9Z0S4 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Cldn13Q9Z0S4 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.02□□□□□ -0.49
Cldn13Q9Z0S4 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.02□□□□□ -0.49
Cldn13Q9Z0S4 Gm6912-201ENSMUST00000117218 544 ntBASIC12.02□□□□□ -0.49
Cldn13Q9Z0S4 Gm15240-201ENSMUST00000118156 720 ntBASIC12.02□□□□□ -0.49
Cldn13Q9Z0S4 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.02□□□□□ -0.49
Cldn13Q9Z0S4 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Cldn13Q9Z0S4 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.02□□□□□ -0.49
Cldn13Q9Z0S4 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Cldn13Q9Z0S4 Gm28631-201ENSMUST00000190740 334 ntBASIC12.02□□□□□ -0.49
Cldn13Q9Z0S4 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.02□□□□□ -0.49
Cldn13Q9Z0S4 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cldn13Q9Z0S4 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cldn13Q9Z0S4 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cldn13Q9Z0S4 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Cldn13Q9Z0S4 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cldn13Q9Z0S4 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.02□□□□□ -0.49
Cldn13Q9Z0S4 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.02□□□□□ -0.49
Cldn13Q9Z0S4 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cldn13Q9Z0S4 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cldn13Q9Z0S4 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cldn13Q9Z0S4 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cldn13Q9Z0S4 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.02□□□□□ -0.49
Cldn13Q9Z0S4 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Cldn13Q9Z0S4 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cldn13Q9Z0S4 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cldn13Q9Z0S4 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cldn13Q9Z0S4 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cldn13Q9Z0S4 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.02□□□□□ -0.49
Cldn13Q9Z0S4 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cldn13Q9Z0S4 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Cldn13Q9Z0S4 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn13Q9Z0S4 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn13Q9Z0S4 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn13Q9Z0S4 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.01□□□□□ -0.49
Cldn13Q9Z0S4 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn13Q9Z0S4 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cldn13Q9Z0S4 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn13Q9Z0S4 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Cldn13Q9Z0S4 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn13Q9Z0S4 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn13Q9Z0S4 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn13Q9Z0S4 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn13Q9Z0S4 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Cldn13Q9Z0S4 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.01□□□□□ -0.49
Cldn13Q9Z0S4 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn13Q9Z0S4 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Cldn13Q9Z0S4 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn13Q9Z0S4 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
Cldn13Q9Z0S4 Gm14928-201ENSMUST00000120198 477 ntBASIC12.01□□□□□ -0.49
Cldn13Q9Z0S4 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn13Q9Z0S4 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn13Q9Z0S4 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn13Q9Z0S4 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn13Q9Z0S4 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.01□□□□□ -0.49
Cldn13Q9Z0S4 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn13Q9Z0S4 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn13Q9Z0S4 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn13Q9Z0S4 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Cldn13Q9Z0S4 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn13Q9Z0S4 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.01□□□□□ -0.49
Cldn13Q9Z0S4 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn13Q9Z0S4 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn13Q9Z0S4 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Cldn13Q9Z0S4 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.01□□□□□ -0.49
Cldn13Q9Z0S4 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms