Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prg4Q9JM99 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prg4Q9JM99 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Prg4Q9JM99 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Prg4Q9JM99 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Prg4Q9JM99 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prg4Q9JM99 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prg4Q9JM99 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prg4Q9JM99 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prg4Q9JM99 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.25□□□□□ -0.45
Prg4Q9JM99 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prg4Q9JM99 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Prg4Q9JM99 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
Prg4Q9JM99 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Prg4Q9JM99 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prg4Q9JM99 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.24□□□□□ -0.45
Prg4Q9JM99 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.24□□□□□ -0.45
Prg4Q9JM99 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prg4Q9JM99 Mir874-201ENSMUST00000104769 76 ntBASIC12.24□□□□□ -0.45
Prg4Q9JM99 Gm11618-201ENSMUST00000117946 267 ntBASIC12.24□□□□□ -0.45
Prg4Q9JM99 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prg4Q9JM99 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Prg4Q9JM99 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prg4Q9JM99 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prg4Q9JM99 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Prg4Q9JM99 Gm8810-201ENSMUST00000172895 754 ntBASIC12.24□□□□□ -0.45
Prg4Q9JM99 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Prg4Q9JM99 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Prg4Q9JM99 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.24□□□□□ -0.45
Prg4Q9JM99 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prg4Q9JM99 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.24□□□□□ -0.45
Prg4Q9JM99 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prg4Q9JM99 Gm45841-201ENSMUST00000207700 164 ntBASIC12.24□□□□□ -0.45
Prg4Q9JM99 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC12.24□□□□□ -0.45
Prg4Q9JM99 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.24□□□□□ -0.45
Prg4Q9JM99 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prg4Q9JM99 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prg4Q9JM99 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.24□□□□□ -0.45
Prg4Q9JM99 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prg4Q9JM99 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prg4Q9JM99 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prg4Q9JM99 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prg4Q9JM99 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Prg4Q9JM99 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prg4Q9JM99 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Prg4Q9JM99 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prg4Q9JM99 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prg4Q9JM99 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prg4Q9JM99 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prg4Q9JM99 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Prg4Q9JM99 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Prg4Q9JM99 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Prg4Q9JM99 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prg4Q9JM99 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prg4Q9JM99 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prg4Q9JM99 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Prg4Q9JM99 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Prg4Q9JM99 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prg4Q9JM99 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.23□□□□□ -0.45
Prg4Q9JM99 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prg4Q9JM99 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prg4Q9JM99 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prg4Q9JM99 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prg4Q9JM99 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prg4Q9JM99 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prg4Q9JM99 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Prg4Q9JM99 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.23□□□□□ -0.45
Prg4Q9JM99 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.23□□□□□ -0.45
Prg4Q9JM99 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.23□□□□□ -0.45
Prg4Q9JM99 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Prg4Q9JM99 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prg4Q9JM99 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prg4Q9JM99 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Prg4Q9JM99 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Prg4Q9JM99 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prg4Q9JM99 Gm16202-201ENSMUST00000117532 544 ntBASIC12.23□□□□□ -0.45
Prg4Q9JM99 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Prg4Q9JM99 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC12.23□□□□□ -0.45
Prg4Q9JM99 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC12.23□□□□□ -0.45
Prg4Q9JM99 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prg4Q9JM99 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC12.23□□□□□ -0.45
Prg4Q9JM99 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Prg4Q9JM99 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Prg4Q9JM99 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Prg4Q9JM99 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC12.23□□□□□ -0.45
Prg4Q9JM99 Gm37922-201ENSMUST00000195596 455 ntBASIC12.23□□□□□ -0.45
Prg4Q9JM99 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC12.23□□□□□ -0.45
Prg4Q9JM99 Gm18062-201ENSMUST00000208020 547 ntBASIC12.23□□□□□ -0.45
Prg4Q9JM99 Gm18055-201ENSMUST00000208254 547 ntBASIC12.23□□□□□ -0.45
Prg4Q9JM99 AC135669.1-202ENSMUST00000216742 540 ntBASIC12.23□□□□□ -0.45
Prg4Q9JM99 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Prg4Q9JM99 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.23□□□□□ -0.45
Prg4Q9JM99 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prg4Q9JM99 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Prg4Q9JM99 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Prg4Q9JM99 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Prg4Q9JM99 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prg4Q9JM99 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Prg4Q9JM99 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Prg4Q9JM99 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms