Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Tubb3Q9ERD7 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.39□□□□□ -0.27
Tubb3Q9ERD7 Gm7653-201ENSMUST00000214567 508 ntBASIC13.39□□□□□ -0.27
Tubb3Q9ERD7 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Tubb3Q9ERD7 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb3Q9ERD7 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.39□□□□□ -0.27
Tubb3Q9ERD7 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb3Q9ERD7 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb3Q9ERD7 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb3Q9ERD7 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb3Q9ERD7 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb3Q9ERD7 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Tubb3Q9ERD7 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.39□□□□□ -0.27
Tubb3Q9ERD7 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb3Q9ERD7 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb3Q9ERD7 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb3Q9ERD7 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tubb3Q9ERD7 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tubb3Q9ERD7 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tubb3Q9ERD7 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tubb3Q9ERD7 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tubb3Q9ERD7 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC13.38□□□□□ -0.27
Tubb3Q9ERD7 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.38□□□□□ -0.27
Tubb3Q9ERD7 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tubb3Q9ERD7 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tubb3Q9ERD7 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tubb3Q9ERD7 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
Tubb3Q9ERD7 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC13.38□□□□□ -0.27
Tubb3Q9ERD7 Gm28631-201ENSMUST00000190740 334 ntBASIC13.38□□□□□ -0.27
Tubb3Q9ERD7 Gm10766-202ENSMUST00000194123 606 ntBASIC13.38□□□□□ -0.27
Tubb3Q9ERD7 Gm8515-201ENSMUST00000194852 576 ntBASIC13.38□□□□□ -0.27
Tubb3Q9ERD7 Gm44719-201ENSMUST00000206404 149 ntBASIC13.38□□□□□ -0.27
Tubb3Q9ERD7 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.38□□□□□ -0.27
Tubb3Q9ERD7 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tubb3Q9ERD7 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Tubb3Q9ERD7 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tubb3Q9ERD7 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tubb3Q9ERD7 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tubb3Q9ERD7 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tubb3Q9ERD7 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tubb3Q9ERD7 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tubb3Q9ERD7 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tubb3Q9ERD7 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tubb3Q9ERD7 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Tubb3Q9ERD7 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Tubb3Q9ERD7 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tubb3Q9ERD7 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Tubb3Q9ERD7 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Gm23984-201ENSMUST00000157139 203 ntBASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Gm37917-201ENSMUST00000194711 392 ntBASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Gm6745-201ENSMUST00000199216 526 ntBASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Tubb3Q9ERD7 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tubb3Q9ERD7 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Tubb3Q9ERD7 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Tubb3Q9ERD7 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.36□□□□□ -0.27
Tubb3Q9ERD7 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.36□□□□□ -0.27
Tubb3Q9ERD7 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms