Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.74□□□□□ -0.21
Nkx2-4Q9EQM3 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-4Q9EQM3 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-4Q9EQM3 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Nkx2-4Q9EQM3 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-4Q9EQM3 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-4Q9EQM3 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-4Q9EQM3 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-4Q9EQM3 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-4Q9EQM3 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-4Q9EQM3 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-4Q9EQM3 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-4Q9EQM3 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.74□□□□□ -0.21
Nkx2-4Q9EQM3 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
Nkx2-4Q9EQM3 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-4Q9EQM3 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-4Q9EQM3 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Nkx2-4Q9EQM3 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.74□□□□□ -0.21
Nkx2-4Q9EQM3 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-4Q9EQM3 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-4Q9EQM3 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Nkx2-4Q9EQM3 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-4Q9EQM3 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-4Q9EQM3 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-4Q9EQM3 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-4Q9EQM3 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-4Q9EQM3 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-4Q9EQM3 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Nkx2-4Q9EQM3 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-4Q9EQM3 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-4Q9EQM3 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-4Q9EQM3 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-4Q9EQM3 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-4Q9EQM3 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.73□□□□□ -0.21
Nkx2-4Q9EQM3 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-4Q9EQM3 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-4Q9EQM3 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Nkx2-4Q9EQM3 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-4Q9EQM3 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.73□□□□□ -0.21
Nkx2-4Q9EQM3 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-4Q9EQM3 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.73□□□□□ -0.21
Nkx2-4Q9EQM3 Gm25732-201ENSMUST00000175168 60 ntBASIC13.73□□□□□ -0.21
Nkx2-4Q9EQM3 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.73□□□□□ -0.21
Nkx2-4Q9EQM3 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-4Q9EQM3 AA914427-201ENSMUST00000193194 1166 ntBASIC13.73□□□□□ -0.21
Nkx2-4Q9EQM3 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC13.73□□□□□ -0.21
Nkx2-4Q9EQM3 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.73□□□□□ -0.21
Nkx2-4Q9EQM3 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-4Q9EQM3 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-4Q9EQM3 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-4Q9EQM3 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC13.73□□□□□ -0.21
Nkx2-4Q9EQM3 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-4Q9EQM3 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Nkx2-4Q9EQM3 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Crry-ps-201ENSMUST00000079090 1309 ntBASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Gm9083-201ENSMUST00000120423 819 ntBASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Mir1943-201ENSMUST00000158276 73 ntBASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Gm28693-202ENSMUST00000190758 331 ntBASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 AC154680.1-201ENSMUST00000224376 859 ntBASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Nkx2-4Q9EQM3 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms