Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cpsf1Q9EPU4 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cpsf1Q9EPU4 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
Cpsf1Q9EPU4 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC18.33■□□□□ 0.53
Cpsf1Q9EPU4 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cpsf1Q9EPU4 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cpsf1Q9EPU4 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cpsf1Q9EPU4 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cpsf1Q9EPU4 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cpsf1Q9EPU4 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cpsf1Q9EPU4 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cpsf1Q9EPU4 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cpsf1Q9EPU4 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cpsf1Q9EPU4 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cpsf1Q9EPU4 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cpsf1Q9EPU4 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cpsf1Q9EPU4 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Cpsf1Q9EPU4 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cpsf1Q9EPU4 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Cpsf1Q9EPU4 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cpsf1Q9EPU4 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cpsf1Q9EPU4 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC18.32■□□□□ 0.52
Cpsf1Q9EPU4 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC18.32■□□□□ 0.52
Cpsf1Q9EPU4 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cpsf1Q9EPU4 Gm24548-201ENSMUST00000158650 108 ntBASIC18.32■□□□□ 0.52
Cpsf1Q9EPU4 Gm37259-201ENSMUST00000193903 849 ntBASIC18.32■□□□□ 0.52
Cpsf1Q9EPU4 Gm43758-201ENSMUST00000199500 367 ntBASIC18.32■□□□□ 0.52
Cpsf1Q9EPU4 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC18.32■□□□□ 0.52
Cpsf1Q9EPU4 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC18.32■□□□□ 0.52
Cpsf1Q9EPU4 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpsf1Q9EPU4 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpsf1Q9EPU4 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC18.32■□□□□ 0.52
Cpsf1Q9EPU4 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC18.32■□□□□ 0.52
Cpsf1Q9EPU4 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Cpsf1Q9EPU4 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Cpsf1Q9EPU4 Gm43579-201ENSMUST00000202387 1307 ntBASIC18.32■□□□□ 0.52
Cpsf1Q9EPU4 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpsf1Q9EPU4 Gm8798-201ENSMUST00000211877 1661 ntBASIC18.32■□□□□ 0.52
Cpsf1Q9EPU4 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpsf1Q9EPU4 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Cpsf1Q9EPU4 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cpsf1Q9EPU4 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpsf1Q9EPU4 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpsf1Q9EPU4 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cpsf1Q9EPU4 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpsf1Q9EPU4 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpsf1Q9EPU4 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC18.32■□□□□ 0.52
Cpsf1Q9EPU4 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC18.32■□□□□ 0.52
Cpsf1Q9EPU4 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cpsf1Q9EPU4 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cpsf1Q9EPU4 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC18.32■□□□□ 0.52
Cpsf1Q9EPU4 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC18.32■□□□□ 0.52
Cpsf1Q9EPU4 Gm3961-201ENSMUST00000204425 994 ntBASIC18.32■□□□□ 0.52
Cpsf1Q9EPU4 Cts7-204ENSMUST00000225321 1257 ntBASIC18.32■□□□□ 0.52
Cpsf1Q9EPU4 AC140406.1-201ENSMUST00000226481 465 ntBASIC18.32■□□□□ 0.52
Cpsf1Q9EPU4 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cpsf1Q9EPU4 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf1Q9EPU4 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf1Q9EPU4 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf1Q9EPU4 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf1Q9EPU4 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf1Q9EPU4 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf1Q9EPU4 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Cpsf1Q9EPU4 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC18.31■□□□□ 0.52
Cpsf1Q9EPU4 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf1Q9EPU4 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC18.31■□□□□ 0.52
Cpsf1Q9EPU4 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf1Q9EPU4 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf1Q9EPU4 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC18.31■□□□□ 0.52
Cpsf1Q9EPU4 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf1Q9EPU4 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf1Q9EPU4 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf1Q9EPU4 AC148324.1-201ENSMUST00000219034 4240 ntBASIC18.31■□□□□ 0.52
Cpsf1Q9EPU4 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf1Q9EPU4 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC18.31■□□□□ 0.52
Cpsf1Q9EPU4 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC18.31■□□□□ 0.52
Cpsf1Q9EPU4 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Cpsf1Q9EPU4 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC18.31■□□□□ 0.52
Cpsf1Q9EPU4 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Cpsf1Q9EPU4 n-R5s77-201ENSMUST00000083757 119 ntBASIC18.31■□□□□ 0.52
Cpsf1Q9EPU4 Olfr582-201ENSMUST00000098212 960 ntBASIC18.31■□□□□ 0.52
Cpsf1Q9EPU4 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cpsf1Q9EPU4 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
Cpsf1Q9EPU4 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf1Q9EPU4 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC18.3■□□□□ 0.52
Cpsf1Q9EPU4 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf1Q9EPU4 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf1Q9EPU4 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf1Q9EPU4 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf1Q9EPU4 Gm5939-201ENSMUST00000119613 2874 ntBASIC18.3■□□□□ 0.52
Cpsf1Q9EPU4 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf1Q9EPU4 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Cpsf1Q9EPU4 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Cpsf1Q9EPU4 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf1Q9EPU4 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cpsf1Q9EPU4 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf1Q9EPU4 Gm44094-201ENSMUST00000204703 2030 ntBASIC18.3■□□□□ 0.52
Cpsf1Q9EPU4 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cpsf1Q9EPU4 Gm27516-201ENSMUST00000184237 98 ntBASIC18.3■□□□□ 0.52
Cpsf1Q9EPU4 Gm42627-201ENSMUST00000197347 224 ntBASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms