Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp5Q9D7S9 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC16.83■□□□□ 0.28
Chmp5Q9D7S9 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp5Q9D7S9 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp5Q9D7S9 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Chmp5Q9D7S9 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp5Q9D7S9 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp5Q9D7S9 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp5Q9D7S9 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp5Q9D7S9 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp5Q9D7S9 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp5Q9D7S9 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp5Q9D7S9 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Chmp5Q9D7S9 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp5Q9D7S9 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp5Q9D7S9 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp5Q9D7S9 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp5Q9D7S9 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC16.82■□□□□ 0.28
Chmp5Q9D7S9 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp5Q9D7S9 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.82■□□□□ 0.28
Chmp5Q9D7S9 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Chmp5Q9D7S9 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Chmp5Q9D7S9 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Chmp5Q9D7S9 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp5Q9D7S9 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Chmp5Q9D7S9 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp5Q9D7S9 Gm5779-201ENSMUST00000218467 910 ntBASIC16.82■□□□□ 0.28
Chmp5Q9D7S9 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Chmp5Q9D7S9 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Chmp5Q9D7S9 Gm3695-201ENSMUST00000087222 1009 ntBASIC16.82■□□□□ 0.28
Chmp5Q9D7S9 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp5Q9D7S9 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp5Q9D7S9 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp5Q9D7S9 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp5Q9D7S9 Gm20633-201ENSMUST00000176742 2831 ntBASIC16.82■□□□□ 0.28
Chmp5Q9D7S9 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp5Q9D7S9 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Chmp5Q9D7S9 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC16.82■□□□□ 0.28
Chmp5Q9D7S9 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC16.81■□□□□ 0.28
Chmp5Q9D7S9 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp5Q9D7S9 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp5Q9D7S9 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp5Q9D7S9 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp5Q9D7S9 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp5Q9D7S9 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Chmp5Q9D7S9 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp5Q9D7S9 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp5Q9D7S9 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp5Q9D7S9 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC16.81■□□□□ 0.28
Chmp5Q9D7S9 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC16.81■□□□□ 0.28
Chmp5Q9D7S9 Gm9229-201ENSMUST00000222777 126 ntBASIC16.81■□□□□ 0.28
Chmp5Q9D7S9 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp5Q9D7S9 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp5Q9D7S9 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp5Q9D7S9 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Chmp5Q9D7S9 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp5Q9D7S9 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp5Q9D7S9 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp5Q9D7S9 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp5Q9D7S9 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp5Q9D7S9 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp5Q9D7S9 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp5Q9D7S9 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp5Q9D7S9 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Chmp5Q9D7S9 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.81■□□□□ 0.28
Chmp5Q9D7S9 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
Chmp5Q9D7S9 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp5Q9D7S9 Gm13859-201ENSMUST00000119936 1423 ntBASIC16.8■□□□□ 0.28
Chmp5Q9D7S9 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp5Q9D7S9 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp5Q9D7S9 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp5Q9D7S9 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp5Q9D7S9 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp5Q9D7S9 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp5Q9D7S9 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC16.8■□□□□ 0.28
Chmp5Q9D7S9 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Chmp5Q9D7S9 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.8■□□□□ 0.28
Chmp5Q9D7S9 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Chmp5Q9D7S9 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp5Q9D7S9 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.8■□□□□ 0.28
Chmp5Q9D7S9 Gm4804-201ENSMUST00000182234 999 ntBASIC16.8■□□□□ 0.28
Chmp5Q9D7S9 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp5Q9D7S9 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp5Q9D7S9 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp5Q9D7S9 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC16.8■□□□□ 0.28
Chmp5Q9D7S9 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp5Q9D7S9 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp5Q9D7S9 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Chmp5Q9D7S9 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp5Q9D7S9 Gm13517-201ENSMUST00000120782 1495 ntBASIC16.8■□□□□ 0.28
Chmp5Q9D7S9 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp5Q9D7S9 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Chmp5Q9D7S9 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp5Q9D7S9 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp5Q9D7S9 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp5Q9D7S9 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp5Q9D7S9 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp5Q9D7S9 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
Chmp5Q9D7S9 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Chmp5Q9D7S9 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms