Protein–RNA interactions for Protein: Q9D132

Upk1a, Uroplakin-1a, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1aQ9D132 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk1aQ9D132 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk1aQ9D132 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk1aQ9D132 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk1aQ9D132 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk1aQ9D132 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.76□□□□□ -0.37
Upk1aQ9D132 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk1aQ9D132 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.76□□□□□ -0.37
Upk1aQ9D132 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk1aQ9D132 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Upk1aQ9D132 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.75□□□□□ -0.37
Upk1aQ9D132 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk1aQ9D132 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk1aQ9D132 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Upk1aQ9D132 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Upk1aQ9D132 Gm13385-201ENSMUST00000121089 220 ntBASIC12.75□□□□□ -0.37
Upk1aQ9D132 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.75□□□□□ -0.37
Upk1aQ9D132 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Upk1aQ9D132 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.75□□□□□ -0.37
Upk1aQ9D132 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.75□□□□□ -0.37
Upk1aQ9D132 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC12.75□□□□□ -0.37
Upk1aQ9D132 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.75□□□□□ -0.37
Upk1aQ9D132 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.75□□□□□ -0.37
Upk1aQ9D132 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk1aQ9D132 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Upk1aQ9D132 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Upk1aQ9D132 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Upk1aQ9D132 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Upk1aQ9D132 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.75□□□□□ -0.37
Upk1aQ9D132 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Upk1aQ9D132 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.75□□□□□ -0.37
Upk1aQ9D132 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.75□□□□□ -0.37
Upk1aQ9D132 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk1aQ9D132 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk1aQ9D132 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk1aQ9D132 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk1aQ9D132 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk1aQ9D132 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk1aQ9D132 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk1aQ9D132 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk1aQ9D132 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk1aQ9D132 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk1aQ9D132 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk1aQ9D132 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk1aQ9D132 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC12.75□□□□□ -0.37
Upk1aQ9D132 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC12.75□□□□□ -0.37
Upk1aQ9D132 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk1aQ9D132 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Upk1aQ9D132 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Upk1aQ9D132 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1aQ9D132 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Upk1aQ9D132 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1aQ9D132 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1aQ9D132 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1aQ9D132 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.74□□□□□ -0.37
Upk1aQ9D132 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1aQ9D132 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Upk1aQ9D132 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.74□□□□□ -0.37
Upk1aQ9D132 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1aQ9D132 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1aQ9D132 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1aQ9D132 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1aQ9D132 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1aQ9D132 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1aQ9D132 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1aQ9D132 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1aQ9D132 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1aQ9D132 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1aQ9D132 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1aQ9D132 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1aQ9D132 Gm11594-201ENSMUST00000122313 162 ntBASIC12.74□□□□□ -0.37
Upk1aQ9D132 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1aQ9D132 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.74□□□□□ -0.37
Upk1aQ9D132 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1aQ9D132 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1aQ9D132 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.74□□□□□ -0.37
Upk1aQ9D132 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1aQ9D132 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1aQ9D132 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1aQ9D132 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1aQ9D132 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Upk1aQ9D132 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Upk1aQ9D132 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1aQ9D132 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1aQ9D132 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1aQ9D132 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1aQ9D132 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.74□□□□□ -0.37
Upk1aQ9D132 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1aQ9D132 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Upk1aQ9D132 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk1aQ9D132 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Upk1aQ9D132 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk1aQ9D132 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk1aQ9D132 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk1aQ9D132 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk1aQ9D132 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk1aQ9D132 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.73□□□□□ -0.37
Upk1aQ9D132 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk1aQ9D132 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Upk1aQ9D132 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms