Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Lsm7Q9CQQ8 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm7Q9CQQ8 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm7Q9CQQ8 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm7Q9CQQ8 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm7Q9CQQ8 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.58□□□□□ -0.24
Lsm7Q9CQQ8 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm7Q9CQQ8 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm7Q9CQQ8 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm7Q9CQQ8 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Lsm7Q9CQQ8 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm7Q9CQQ8 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Lsm7Q9CQQ8 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Lsm7Q9CQQ8 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm7Q9CQQ8 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm7Q9CQQ8 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm7Q9CQQ8 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm7Q9CQQ8 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm7Q9CQQ8 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm7Q9CQQ8 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm7Q9CQQ8 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm7Q9CQQ8 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.57□□□□□ -0.24
Lsm7Q9CQQ8 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm7Q9CQQ8 Gm11803-201ENSMUST00000119966 444 ntBASIC13.57□□□□□ -0.24
Lsm7Q9CQQ8 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm7Q9CQQ8 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm7Q9CQQ8 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.57□□□□□ -0.24
Lsm7Q9CQQ8 Mir7085-201ENSMUST00000184353 66 ntBASIC13.57□□□□□ -0.24
Lsm7Q9CQQ8 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm7Q9CQQ8 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Lsm7Q9CQQ8 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm7Q9CQQ8 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm7Q9CQQ8 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Lsm7Q9CQQ8 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.57□□□□□ -0.24
Lsm7Q9CQQ8 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Lsm7Q9CQQ8 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm7Q9CQQ8 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm7Q9CQQ8 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm7Q9CQQ8 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.57□□□□□ -0.24
Lsm7Q9CQQ8 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm7Q9CQQ8 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm7Q9CQQ8 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm7Q9CQQ8 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm7Q9CQQ8 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC13.57□□□□□ -0.24
Lsm7Q9CQQ8 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Lsm7Q9CQQ8 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm7Q9CQQ8 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Lsm7Q9CQQ8 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Lsm7Q9CQQ8 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm7Q9CQQ8 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm7Q9CQQ8 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Lsm7Q9CQQ8 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.56□□□□□ -0.24
Lsm7Q9CQQ8 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm7Q9CQQ8 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Lsm7Q9CQQ8 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm7Q9CQQ8 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm7Q9CQQ8 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.56□□□□□ -0.24
Lsm7Q9CQQ8 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.56□□□□□ -0.24
Lsm7Q9CQQ8 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm7Q9CQQ8 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm7Q9CQQ8 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm7Q9CQQ8 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Lsm7Q9CQQ8 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Lsm7Q9CQQ8 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm7Q9CQQ8 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm7Q9CQQ8 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm7Q9CQQ8 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Lsm7Q9CQQ8 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm7Q9CQQ8 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.56□□□□□ -0.24
Lsm7Q9CQQ8 Gm22331-201ENSMUST00000158066 136 ntBASIC13.56□□□□□ -0.24
Lsm7Q9CQQ8 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Lsm7Q9CQQ8 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm7Q9CQQ8 Gm45784-201ENSMUST00000188360 142 ntBASIC13.56□□□□□ -0.24
Lsm7Q9CQQ8 AY702102-202ENSMUST00000194651 1173 ntBASIC13.56□□□□□ -0.24
Lsm7Q9CQQ8 Gm8598-201ENSMUST00000221184 836 ntBASIC13.56□□□□□ -0.24
Lsm7Q9CQQ8 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC13.56□□□□□ -0.24
Lsm7Q9CQQ8 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm7Q9CQQ8 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm7Q9CQQ8 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm7Q9CQQ8 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm7Q9CQQ8 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm7Q9CQQ8 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Lsm7Q9CQQ8 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm7Q9CQQ8 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm7Q9CQQ8 Gm10040-201ENSMUST00000080726 1662 ntBASIC13.56□□□□□ -0.24
Lsm7Q9CQQ8 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm7Q9CQQ8 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Lsm7Q9CQQ8 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Lsm7Q9CQQ8 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm7Q9CQQ8 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Lsm7Q9CQQ8 Gm15544-201ENSMUST00000118776 1531 ntBASIC13.55□□□□□ -0.24
Lsm7Q9CQQ8 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm7Q9CQQ8 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.55□□□□□ -0.24
Lsm7Q9CQQ8 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm7Q9CQQ8 Gm13226-201ENSMUST00000117838 404 ntBASIC13.55□□□□□ -0.24
Lsm7Q9CQQ8 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.55□□□□□ -0.24
Lsm7Q9CQQ8 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm7Q9CQQ8 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Lsm7Q9CQQ8 Gm8810-201ENSMUST00000172895 754 ntBASIC13.55□□□□□ -0.24
Lsm7Q9CQQ8 Proscos-202ENSMUST00000178990 666 ntBASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms