Protein–RNA interactions for Protein: Q9CQD0

Rpl39l, RIKEN cDNA 4930517K11, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39lQ9CQD0 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Rpl39lQ9CQD0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Rpl39lQ9CQD0 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Rpl39lQ9CQD0 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC8.73□□□□□ -1.01
Rpl39lQ9CQD0 Gm2272-201ENSMUST00000194903 582 ntBASIC8.73□□□□□ -1.01
Rpl39lQ9CQD0 Gm44608-201ENSMUST00000206827 855 ntBASIC8.73□□□□□ -1.01
Rpl39lQ9CQD0 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Rpl39lQ9CQD0 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Rpl39lQ9CQD0 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Rpl39lQ9CQD0 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
Rpl39lQ9CQD0 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
Rpl39lQ9CQD0 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Rpl39lQ9CQD0 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Rpl39lQ9CQD0 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Rpl39lQ9CQD0 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Rpl39lQ9CQD0 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Rpl39lQ9CQD0 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Rpl39lQ9CQD0 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Rpl39lQ9CQD0 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Rpl39lQ9CQD0 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Rpl39lQ9CQD0 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Rpl39lQ9CQD0 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Rpl39lQ9CQD0 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Rpl39lQ9CQD0 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Rpl39lQ9CQD0 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Rpl39lQ9CQD0 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Rpl39lQ9CQD0 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Rpl39lQ9CQD0 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Rpl39lQ9CQD0 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Rpl39lQ9CQD0 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC8.73□□□□□ -1.01
Rpl39lQ9CQD0 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Rpl39lQ9CQD0 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Rpl39lQ9CQD0 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Rpl39lQ9CQD0 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Rpl39lQ9CQD0 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Rpl39lQ9CQD0 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Rpl39lQ9CQD0 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Rpl39lQ9CQD0 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Rpl39lQ9CQD0 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Rpl39lQ9CQD0 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Zfp125-201ENSMUST00000079237 2488 ntBASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Gm25990-201ENSMUST00000102440 86 ntBASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Gm10231-201ENSMUST00000181584 441 ntBASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Gm27704-201ENSMUST00000185094 107 ntBASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Gm29741-201ENSMUST00000192667 421 ntBASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Gm10175-202ENSMUST00000208752 441 ntBASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 AC154471.1-201ENSMUST00000224418 436 ntBASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Gm37105-201ENSMUST00000192251 2085 ntBASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC8.72□□□□□ -1.01
Rpl39lQ9CQD0 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms