Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa3Q9CQ71 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC14.24□□□□□ -0.13
Rpa3Q9CQ71 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa3Q9CQ71 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Rpa3Q9CQ71 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa3Q9CQ71 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa3Q9CQ71 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa3Q9CQ71 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa3Q9CQ71 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa3Q9CQ71 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Rpa3Q9CQ71 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rpa3Q9CQ71 Gm21038-201ENSMUST00000222205 1383 ntBASIC14.23□□□□□ -0.13
Rpa3Q9CQ71 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpa3Q9CQ71 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpa3Q9CQ71 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpa3Q9CQ71 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Rpa3Q9CQ71 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rpa3Q9CQ71 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rpa3Q9CQ71 Gm12341-201ENSMUST00000119724 503 ntBASIC14.23□□□□□ -0.13
Rpa3Q9CQ71 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rpa3Q9CQ71 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC14.23□□□□□ -0.13
Rpa3Q9CQ71 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.23□□□□□ -0.13
Rpa3Q9CQ71 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC14.23□□□□□ -0.13
Rpa3Q9CQ71 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpa3Q9CQ71 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Rpa3Q9CQ71 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.23□□□□□ -0.13
Rpa3Q9CQ71 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Rpa3Q9CQ71 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpa3Q9CQ71 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpa3Q9CQ71 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpa3Q9CQ71 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpa3Q9CQ71 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpa3Q9CQ71 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Rpa3Q9CQ71 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpa3Q9CQ71 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.23□□□□□ -0.13
Rpa3Q9CQ71 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpa3Q9CQ71 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpa3Q9CQ71 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Rpa3Q9CQ71 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 Gm18307-201ENSMUST00000206864 949 ntBASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 Gm15823-201ENSMUST00000064305 670 ntBASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Rpa3Q9CQ71 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa3Q9CQ71 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa3Q9CQ71 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa3Q9CQ71 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa3Q9CQ71 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Rpa3Q9CQ71 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa3Q9CQ71 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa3Q9CQ71 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa3Q9CQ71 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa3Q9CQ71 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.21□□□□□ -0.13
Rpa3Q9CQ71 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa3Q9CQ71 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa3Q9CQ71 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa3Q9CQ71 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa3Q9CQ71 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Rpa3Q9CQ71 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Rpa3Q9CQ71 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms