Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ska1Q9CPV1 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ska1Q9CPV1 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Ska1Q9CPV1 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ska1Q9CPV1 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ska1Q9CPV1 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.74□□□□□ -0.37
Ska1Q9CPV1 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.74□□□□□ -0.37
Ska1Q9CPV1 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ska1Q9CPV1 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ska1Q9CPV1 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.74□□□□□ -0.37
Ska1Q9CPV1 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ska1Q9CPV1 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ska1Q9CPV1 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.74□□□□□ -0.37
Ska1Q9CPV1 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.74□□□□□ -0.37
Ska1Q9CPV1 Chchd1-203ENSMUST00000224633 557 ntBASIC12.74□□□□□ -0.37
Ska1Q9CPV1 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Ska1Q9CPV1 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ska1Q9CPV1 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ska1Q9CPV1 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ska1Q9CPV1 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ska1Q9CPV1 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ska1Q9CPV1 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ska1Q9CPV1 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ska1Q9CPV1 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ska1Q9CPV1 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ska1Q9CPV1 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ska1Q9CPV1 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ska1Q9CPV1 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ska1Q9CPV1 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ska1Q9CPV1 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Ska1Q9CPV1 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.74□□□□□ -0.37
Ska1Q9CPV1 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ska1Q9CPV1 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ska1Q9CPV1 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.73□□□□□ -0.37
Ska1Q9CPV1 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 Gm7774-201ENSMUST00000200064 533 ntBASIC12.73□□□□□ -0.37
Ska1Q9CPV1 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.73□□□□□ -0.37
Ska1Q9CPV1 Gm5312-201ENSMUST00000203728 547 ntBASIC12.73□□□□□ -0.37
Ska1Q9CPV1 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 Gm18027-201ENSMUST00000218947 619 ntBASIC12.73□□□□□ -0.37
Ska1Q9CPV1 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ska1Q9CPV1 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ska1Q9CPV1 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ska1Q9CPV1 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ska1Q9CPV1 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ska1Q9CPV1 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ska1Q9CPV1 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ska1Q9CPV1 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Ska1Q9CPV1 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ska1Q9CPV1 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Ska1Q9CPV1 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ska1Q9CPV1 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ska1Q9CPV1 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ska1Q9CPV1 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ska1Q9CPV1 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ska1Q9CPV1 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ska1Q9CPV1 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ska1Q9CPV1 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ska1Q9CPV1 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms