Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Gm5264-201ENSMUST00000190584 848 ntBASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.14□□□□□ -0.47
Krt88Q9CPR6 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Krt88Q9CPR6 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Krt88Q9CPR6 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Krt88Q9CPR6 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Krt88Q9CPR6 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.13□□□□□ -0.47
Krt88Q9CPR6 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Krt88Q9CPR6 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Krt88Q9CPR6 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.13□□□□□ -0.47
Krt88Q9CPR6 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Krt88Q9CPR6 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Krt88Q9CPR6 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Krt88Q9CPR6 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Krt88Q9CPR6 Gm15467-201ENSMUST00000120582 445 ntBASIC12.13□□□□□ -0.47
Krt88Q9CPR6 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Krt88Q9CPR6 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.13□□□□□ -0.47
Krt88Q9CPR6 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.13□□□□□ -0.47
Krt88Q9CPR6 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Krt88Q9CPR6 Gm17271-201ENSMUST00000165535 355 ntBASIC12.13□□□□□ -0.47
Krt88Q9CPR6 Gm27631-201ENSMUST00000184163 466 ntBASIC12.13□□□□□ -0.47
Krt88Q9CPR6 Mir8117-201ENSMUST00000184773 107 ntBASIC12.13□□□□□ -0.47
Krt88Q9CPR6 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.13□□□□□ -0.47
Krt88Q9CPR6 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Krt88Q9CPR6 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Krt88Q9CPR6 Mir497b-201ENSMUST00000093601 125 ntBASIC12.13□□□□□ -0.47
Krt88Q9CPR6 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Krt88Q9CPR6 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Krt88Q9CPR6 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Krt88Q9CPR6 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Krt88Q9CPR6 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Krt88Q9CPR6 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Krt88Q9CPR6 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Krt88Q9CPR6 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Krt88Q9CPR6 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Krt88Q9CPR6 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Krt88Q9CPR6 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.13□□□□□ -0.47
Krt88Q9CPR6 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Krt88Q9CPR6 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Krt88Q9CPR6 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Krt88Q9CPR6 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Krt88Q9CPR6 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Krt88Q9CPR6 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Krt88Q9CPR6 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Krt88Q9CPR6 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Krt88Q9CPR6 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Krt88Q9CPR6 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Krt88Q9CPR6 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Krt88Q9CPR6 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Krt88Q9CPR6 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Krt88Q9CPR6 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Krt88Q9CPR6 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Krt88Q9CPR6 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Krt88Q9CPR6 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC12.12□□□□□ -0.47
Krt88Q9CPR6 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Krt88Q9CPR6 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Krt88Q9CPR6 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Krt88Q9CPR6 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.12□□□□□ -0.47
Krt88Q9CPR6 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC12.12□□□□□ -0.47
Krt88Q9CPR6 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Krt88Q9CPR6 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.12□□□□□ -0.47
Krt88Q9CPR6 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC12.12□□□□□ -0.47
Krt88Q9CPR6 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.12□□□□□ -0.47
Krt88Q9CPR6 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.12□□□□□ -0.47
Krt88Q9CPR6 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Krt88Q9CPR6 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Krt88Q9CPR6 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Krt88Q9CPR6 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Krt88Q9CPR6 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC12.12□□□□□ -0.47
Krt88Q9CPR6 Gm5867-201ENSMUST00000063197 592 ntBASIC12.12□□□□□ -0.47
Krt88Q9CPR6 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
Krt88Q9CPR6 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Krt88Q9CPR6 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Krt88Q9CPR6 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Krt88Q9CPR6 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Krt88Q9CPR6 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.12□□□□□ -0.47
Krt88Q9CPR6 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.12□□□□□ -0.47
Krt88Q9CPR6 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms