Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.21□□□□□ -0.3
Trim8Q99PJ2 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.2□□□□□ -0.3
Trim8Q99PJ2 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim8Q99PJ2 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim8Q99PJ2 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim8Q99PJ2 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trim8Q99PJ2 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim8Q99PJ2 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim8Q99PJ2 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim8Q99PJ2 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim8Q99PJ2 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim8Q99PJ2 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim8Q99PJ2 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim8Q99PJ2 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim8Q99PJ2 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.2□□□□□ -0.3
Trim8Q99PJ2 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Trim8Q99PJ2 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trim8Q99PJ2 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Trim8Q99PJ2 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.2□□□□□ -0.3
Trim8Q99PJ2 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.2□□□□□ -0.3
Trim8Q99PJ2 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.2□□□□□ -0.3
Trim8Q99PJ2 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.2□□□□□ -0.3
Trim8Q99PJ2 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Trim8Q99PJ2 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.2□□□□□ -0.3
Trim8Q99PJ2 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.2□□□□□ -0.3
Trim8Q99PJ2 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim8Q99PJ2 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
Trim8Q99PJ2 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim8Q99PJ2 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trim8Q99PJ2 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Trim8Q99PJ2 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim8Q99PJ2 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim8Q99PJ2 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.2□□□□□ -0.3
Trim8Q99PJ2 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trim8Q99PJ2 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim8Q99PJ2 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim8Q99PJ2 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim8Q99PJ2 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim8Q99PJ2 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.2□□□□□ -0.3
Trim8Q99PJ2 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim8Q99PJ2 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trim8Q99PJ2 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.2□□□□□ -0.3
Trim8Q99PJ2 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Trim8Q99PJ2 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.19□□□□□ -0.3
Trim8Q99PJ2 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Gm25287-201ENSMUST00000103846 110 ntBASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Gm22918-201ENSMUST00000103855 110 ntBASIC13.19□□□□□ -0.3
Trim8Q99PJ2 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Mir1897-201ENSMUST00000122581 272 ntBASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Gm8396-201ENSMUST00000057361 823 ntBASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Trim8Q99PJ2 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim8Q99PJ2 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Trim8Q99PJ2 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Trim8Q99PJ2 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim8Q99PJ2 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trim8Q99PJ2 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.18□□□□□ -0.3
Trim8Q99PJ2 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim8Q99PJ2 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.18□□□□□ -0.3
Trim8Q99PJ2 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trim8Q99PJ2 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms