Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC17.54■□□□□ 0.4
Rtn4Q99P72 2810404M03Rik-201ENSMUST00000188324 1245 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn4Q99P72 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn4Q99P72 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC17.54■□□□□ 0.4
Rtn4Q99P72 Gm37676-201ENSMUST00000195496 507 ntBASIC17.54■□□□□ 0.4
Rtn4Q99P72 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Rtn4Q99P72 AC123645.1-201ENSMUST00000228469 605 ntBASIC17.54■□□□□ 0.4
Rtn4Q99P72 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Rtn4Q99P72 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn4Q99P72 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Rtn4Q99P72 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn4Q99P72 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn4Q99P72 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn4Q99P72 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn4Q99P72 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn4Q99P72 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn4Q99P72 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
Rtn4Q99P72 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn4Q99P72 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn4Q99P72 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.54■□□□□ 0.4
Rtn4Q99P72 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn4Q99P72 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn4Q99P72 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn4Q99P72 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn4Q99P72 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Rtn4Q99P72 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn4Q99P72 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn4Q99P72 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn4Q99P72 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn4Q99P72 Gm38325-201ENSMUST00000194507 1377 ntBASIC17.53■□□□□ 0.4
Rtn4Q99P72 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn4Q99P72 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn4Q99P72 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rtn4Q99P72 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn4Q99P72 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rtn4Q99P72 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rtn4Q99P72 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn4Q99P72 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn4Q99P72 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rtn4Q99P72 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn4Q99P72 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Rtn4Q99P72 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn4Q99P72 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn4Q99P72 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn4Q99P72 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn4Q99P72 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
Rtn4Q99P72 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC17.53■□□□□ 0.4
Rtn4Q99P72 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
Rtn4Q99P72 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn4Q99P72 Gm17226-201ENSMUST00000166637 780 ntTSL 3 BASIC17.53■□□□□ 0.4
Rtn4Q99P72 Gm4141-201ENSMUST00000174364 921 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rtn4Q99P72 Gm4201-201ENSMUST00000174775 921 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rtn4Q99P72 Gm43894-201ENSMUST00000203274 688 ntBASIC17.53■□□□□ 0.4
Rtn4Q99P72 AC153936.1-201ENSMUST00000219874 395 ntBASIC17.53■□□□□ 0.4
Rtn4Q99P72 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn4Q99P72 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Rtn4Q99P72 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Rtn4Q99P72 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn4Q99P72 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Rtn4Q99P72 AC166574.6-201ENSMUST00000227889 1806 ntBASIC17.53■□□□□ 0.4
Rtn4Q99P72 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn4Q99P72 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn4Q99P72 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn4Q99P72 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn4Q99P72 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn4Q99P72 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn4Q99P72 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rtn4Q99P72 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rtn4Q99P72 Atp6v1c2-202ENSMUST00000095820 1549 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rtn4Q99P72 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rtn4Q99P72 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rtn4Q99P72 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rtn4Q99P72 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC17.52■□□□□ 0.4
Rtn4Q99P72 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rtn4Q99P72 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rtn4Q99P72 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rtn4Q99P72 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rtn4Q99P72 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Rtn4Q99P72 Gm42928-201ENSMUST00000197338 3339 ntBASIC17.52■□□□□ 0.4
Rtn4Q99P72 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Rtn4Q99P72 Gm12585-201ENSMUST00000117307 290 ntBASIC17.52■□□□□ 0.4
Rtn4Q99P72 Gm1866-201ENSMUST00000120701 477 ntBASIC17.52■□□□□ 0.4
Rtn4Q99P72 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC17.52■□□□□ 0.4
Rtn4Q99P72 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC17.52■□□□□ 0.4
Rtn4Q99P72 Gm21854-201ENSMUST00000179901 471 ntBASIC17.52■□□□□ 0.4
Rtn4Q99P72 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rtn4Q99P72 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rtn4Q99P72 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC17.52■□□□□ 0.4
Rtn4Q99P72 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC17.52■□□□□ 0.4
Rtn4Q99P72 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Rtn4Q99P72 Gm43438-201ENSMUST00000198133 379 ntBASIC17.52■□□□□ 0.4
Rtn4Q99P72 Gm45384-201ENSMUST00000210451 277 ntBASIC17.52■□□□□ 0.4
Rtn4Q99P72 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Rtn4Q99P72 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rtn4Q99P72 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rtn4Q99P72 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rtn4Q99P72 9630028H03Rik-202ENSMUST00000153402 1559 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Rtn4Q99P72 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Rtn4Q99P72 Gm43061-201ENSMUST00000198850 2241 ntBASIC17.52■□□□□ 0.39
Rtn4Q99P72 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms